Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g0418 ATGGCAATAATGGCTTCTGGCACTACCCTTTCACTCTCCAAGGTTCTTTTCAACTCATCAGAATCACCACAAAATGTTCAACTCATCAAGCTCCCACGTTTGAGATCAGCTACTACAATAGTTTATGCTGCTCCAGAAAGAATATCACAGAAGGTGGAAGAGAGTATAAAGAATGCAAAGGAAACTTGTTCTGATGACCCAACTAGCGGCGAATGTGTGGCGGCGTGGGATGAGGTGGAGGAGCTGAGTGCGGCGGCGAGTCATGCAAGAGATAGGAGTAAGGAGTTATCTGATCCATTGGAGAATTATTGCAAGGATAACCCTGAAACCATTGAATGCAAAACTTATGATAGCTGA 357 0.4426 MAIMASGTTLSLSKVLFNSSESPQNVQLIKLPRLRSATTIVYAAPERISQKVEESIKNAKETCSDDPTSGECVAAWDEVEELSAAASHARDRSKELSDPLENYCKDNPETIECKTYDS 118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g0418 118 PANTHER CALVIN CYCLE PROTEIN CP12-2, CHLOROPLASTIC 1 117 IPR039314 -
Lal18g0418 118 PANTHER CALVIN CYCLE PROTEIN CP12-1 1 117 - -
Lal18g0418 118 SMART CP12_2 48 118 IPR003823 -
Lal18g0418 118 Pfam CP12 domain 48 117 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g0418 Lal-Chr18 3523928 3524284 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g0418 - - gmx:100812168 150.599
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal18g0418 18 3523928 3524284 Lal24g0425 24 3028333 3035457 PCT
Lal24g0425 24 3028333 3035457 Lal18g0418 18 3523928 3524284 PCT