Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal24g0415 ATGGAGCAAAATACTGAAAACCTTAACGTTATCATAAGCAATAAGCCAAATGCAATCGTTGTTCACCCTCCTAATCATTATGATATTAAACCTTCCCTTAAGAAGAAGAAGCATGGCACCAAGAACATTTTCAAGGTGGCACTCTTCATGATGCGAGGTGGTCACAAAAAATCAAAATTGCTCCTTAAAGATGATGGTTCTGGAAGCATATGGAGGAAGCTGGTTGGGTCAATGAGACCATTGCACCTACAAAACAATCAATCTCCAATTCAAACTCCTAAAGCCAAAACCATTTTAACATTGCCTTATGAAAATAATACTAATAACATTGATATTCATCAAGGCGAGGTGGATGGATTTGATTCAGCTTCTGAGTTTGCGAATTCTCCGTCTCCGGCTAGTAGCCGCTACGCTTCGGCTGTAGGGCTAAATGAAATGGTTCAAGATGAGGAAAACCATAAGGAAGAGGTTAAAGAAGAAGAAGAAGAAGAGAATGTTATGGAGGAAGATTATGGTAATGGAGATGAGATGATTGATGCTAAGGCTGAAGAGTTTATTGCACAGTTTTACAGAGATATGAAGTTGCAAAGCTTGGACATCGTAGATCATCGATTCATGGAGATAAGTATGAGATCATTAGGCTTATAA 648 0.3858 MEQNTENLNVIISNKPNAIVVHPPNHYDIKPSLKKKKHGTKNIFKVALFMMRGGHKKSKLLLKDDGSGSIWRKLVGSMRPLHLQNNQSPIQTPKAKTILTLPYENNTNNIDIHQGEVDGFDSASEFANSPSPASSRYASAVGLNEMVQDEENHKEEVKEEEEEENVMEEDYGNGDEMIDAKAEEFIAQFYRDMKLQSLDIVDHRFMEISMRSLGL 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal24g0415 215 PANTHER COTTON FIBER PROTEIN 1 209 - -
Lal24g0415 215 PANTHER COTTON FIBER PROTEIN 1 209 - -
Lal24g0415 215 MobiDBLite consensus disorder prediction 151 170 - -
Lal24g0415 215 Coils Coil 140 170 - -
Lal24g0415 215 Pfam Cotton fibre expressed protein 175 207 IPR008480 -
Lal24g0415 215 MobiDBLite consensus disorder prediction 155 170 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal24g0415 Lal-Chr24 2952959 2953606 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal24g0415 - - gmx:100800206 196.052
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal13g0513 13 3311272 3311901 Lal24g0415 24 2952959 2953606 LSH
Lal3g1364 3 19410783 19411472 Lal24g0415 24 2952959 2953606 PCT
Lal24g0415 24 2952959 2953606 Lal3g1364 3 19410783 19411472 PCT