Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal13g0513 ATGGAGTCAAAGTCTGAACAAGTTAATGCAACCATAAGCATTAACCCAAACACAATAGTTGCTCACCCTTCTTATCATTGTGATCAAGAACCTGAACCCTCCGTAGTGGAGAAGAAGAAGAAGACGCATGGCAGCAAGAACATTTTCAAGGTGGCTTTGTTCATGATGCGAGGTCATCATAGGAAATCAAAACTTCTCCATGTGGATGATGGTTCTAGAAGCATATGGAGGAACGTGGTTGGATCCATGAGACCATTGCACCTACAAAACAACAATTTTCCAATTCAAATTCCTAAATCCAAATCCAACACTATTACCACCTTGCCATATGAAAATCAAAACACTAGTGATCATCATAGCGATGTGGATGGTTTTGATTCTGCGTCCGATTTTGCGAATTCGCCTTCTCCGATGAGTAGCCGCTATGCTTCGGCGGTAGGGCTAAATGAAATGGTTCAGGATGAAGAGAATGTGATGGTGGAAGAAGATGGTAATGGTGATGAGATGATTGATGCAAAGGCAGAAGAATTCATTGCTCGGTTTTACCGAGAAATGAAGTTGCAAAGCTTGGACATCACGGATCCTCATTACAACGAGATAAGTATGAGGTCGTTAGGCTTATCATGCTGA 630 0.419 MESKSEQVNATISINPNTIVAHPSYHCDQEPEPSVVEKKKKTHGSKNIFKVALFMMRGHHRKSKLLHVDDGSRSIWRNVVGSMRPLHLQNNNFPIQIPKSKSNTITTLPYENQNTSDHHSDVDGFDSASDFANSPSPMSSRYASAVGLNEMVQDEENVMVEEDGNGDEMIDAKAEEFIARFYREMKLQSLDITDPHYNEISMRSLGLSC 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal13g0513 209 PANTHER COTTON FIBER PROTEIN 1 202 - -
Lal13g0513 209 PANTHER COTTON FIBER PROTEIN 1 202 - -
Lal13g0513 209 Pfam Cotton fibre expressed protein 167 199 IPR008480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal13g0513 Lal-Chr13 3311272 3311901 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal13g0513 - - gmx:100800206 205.682
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal13g0513 13 3311272 3311901 Lal24g0415 24 2952959 2953606 LSH
Lal3g1364 3 19410783 19411472 Lal13g0513 13 3311272 3311901 PCT
Lal13g0513 13 3311272 3311901 Lal3g1364 3 19410783 19411472 PCT