Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal24g0398 ATGTCTTCAATTAGAATCCTTTGTATCTTGTTCTCTCTAACACTAACCTATGCAATAACCCAACAAGACAGTCCTTTATCAGCATACGAGATTATAGAGCAATATGGTTTCCCACAAGGTATTCTCCCCAAAGGCATCACAGGCTATGCCCTCAACAGAGAAACAGGTCAATTTGAAGCATATCTAGAAGGAAGTTGCAGCTTCACCATAGAATCCTACACCCTCAAGTACAAGCCAACAATTACCGGTGTTATCTCTAACGGCAAGCTCGATAAACTTAAGGGTGTTTCCGTTAAGATTTTGTTGTTGTGGCTTAATATCGTTGAGGTGGTTCGTGACGGTGATGACCTTGCTTTCTCTGTGGGTATTGCTTCAGCTAATTTTGGAGTTGATAACTTCTTGGAAAGTCCTCAGTGTGGGTGTGGATTCAATTGCAACGAGTTTACCCAAATTGAACCTGAATGGTACATACCAAAAGTTTTCTATCCCACTGTACCTGAGAAGGATTGGTTGTCTCATCCATCTCCCTAA 531 0.4143 MSSIRILCILFSLTLTYAITQQDSPLSAYEIIEQYGFPQGILPKGITGYALNRETGQFEAYLEGSCSFTIESYTLKYKPTITGVISNGKLDKLKGVSVKILLLWLNIVEVVRDGDDLAFSVGIASANFGVDNFLESPQCGCGFNCNEFTQIEPEWYIPKVFYPTVPEKDWLSHPSP 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal24g0398 176 SUPERFAMILY At5g01610-like 7 145 IPR036758 -
Lal24g0398 176 Pfam Protein of unknown function, DUF538 28 133 IPR007493 -
Lal24g0398 176 PANTHER DUF538 FAMILY PROTEIN 8 151 - -
Lal24g0398 176 Gene3D - 14 136 IPR036758 -
Lal24g0398 176 PANTHER T31J12.3 PROTEIN-RELATED 8 151 IPR007493 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal24g0398 Lal-Chr24 2852399 2853294 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal24g0398 - - ahf:112695788 202.986
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal13g0495 13 3202595 3203080 Lal24g0398 24 2852399 2853294 LSH
Lal3g1351 3 19318092 19318571 Lal24g0398 24 2852399 2853294 PCT
Lal24g0398 24 2852399 2853294 Lal3g1351 3 19318092 19318571 PCT