Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal13g0495 ATGTCCATCACCGCCATCCTCCTCCTCTTCACCGCCGTCTTCCTCCTCCTCCCACCGCCTCTCACTTCCTCTTCCGCCCCAACCGCCTACGACCTCCTCGCACGCTACAACTTCCCGGAAGGTGTCCTCCCGAAAGGAATCACCGGTTACGAATTAGACGAATCTAGCGGTAAATTCCGCGCGTATTTGAACGGAACTTGTAGTTTCTCTCTAGAAGGTTCTTATCAATTGAGCTATAAACCTATCATCAGCGGCCGCATTTCGCAGAATAGGCTCACCGATCTACGTGGAGTTAGCGTCAAGGTTCTCTTCTTGTGGCTCAACATCGTGGAGGTTGTTCGAGACGGTGATGACCTTGATTTCTCGGTAGGTATCGCTTCCGCTTCGTTTTCGTTAGATAATTTCTTTGTTTCACCGCAGTGTGGTTGTGGATTGGATTGCGGTGATGATGTTGAAAACCCTTCCCTTCCCCTTTCCTCCATGTAG 486 0.5062 MSITAILLLFTAVFLLLPPPLTSSSAPTAYDLLARYNFPEGVLPKGITGYELDESSGKFRAYLNGTCSFSLEGSYQLSYKPIISGRISQNRLTDLRGVSVKVLFLWLNIVEVVRDGDDLDFSVGIASASFSLDNFFVSPQCGCGLDCGDDVENPSLPLSSM 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal13g0495 161 Pfam Protein of unknown function, DUF538 29 135 IPR007493 -
Lal13g0495 161 PANTHER F22D16.19 PROTEIN 9 150 - -
Lal13g0495 161 Gene3D - 18 142 IPR036758 -
Lal13g0495 161 PANTHER T31J12.3 PROTEIN-RELATED 9 150 IPR007493 -
Lal13g0495 161 SUPERFAMILY At5g01610-like 4 147 IPR036758 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal13g0495 Lal-Chr13 3202595 3203080 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal13g0495 - - adu:107476078 212.616
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal13g0495 13 3202595 3203080 Lal13g0495 13 3202595 3203080 ECH
Lal13g0495 13 3202595 3203080 Lal24g0398 24 2852399 2853294 LSH
Lal3g1351 3 19318092 19318571 Lal13g0495 13 3202595 3203080 PCT
Lal13g0495 13 3202595 3203080 Lal3g1351 3 19318092 19318571 PCT