Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal24g0226 ATGACTCCAACATTCAACAACCCACTCTCCGAAATATCTCCGTCTCCGTCACCGTCATCAGCGACGGCGCCGGCTCTGGTATTATCAAACTCCGGCAAGAGAATTGACCAAACTGGGAAGAAGAAATACGTGAAGCAAGTAACGGGTCGCCATAACGACACAGAGCTTCACTTAGCTGCTCAAAGGGGTGATGTTGGTGCAGTGAAGCAGATCCTTCTTGATATTGGGTCTCAGATAATGGGAACTGTGAACGATGATGGTGGTGATGGTGATGTTGATGATCTTAAGGCTGAGATTGCTGAAGTTCGCGCTAGTGTTGTGAATGAAGAGAATGAACTTGGAGAAACTCCTCTTTTCACTGCTGCTGAAAAAGGACACCTTGATGTTGTTAAAGAGTTGTTGAACTATTCTACTAATGAAACCGTTTCAAAGAAGAATCGATCAGGGTTTAATCCCTTGCATATAGCTGCTAGTCAAGGACATCATGCCATTGTTCAGGTTTTACTAGACTATGATCCAGGATTAAGCAAAACAATTGGTCCATCCAATGCCACTCCACTTATAACTGCTGCAACAAGAGGCCACACAGAAGTGGTGAATGAATTGCTGTCAAAGGACAGTAGCTTGTTGGAAATCGCTAGATCCAATGGTAAAAATGCATTGCATTTAGCGGCTCGTCCGGGTCATGTAGATATTGTAAAAGCCTTGCTCATTAAGGATCCACAATTGGCACGGCGGACTGACAAGAAAGGGCAGACTGCATTGCATATGGCTGTAAAAGGGCAAAGTTGTGATGTGGTGAAATTGCTTCTTGAGGCTGATGCTGCTATTGTTATGCTTCCTGACAAATTTGGTAACACTGCATTACATGTTGCTACCAGGAAAAAGCGAGTAGAGATAGTGAATGAGTTATTAAATCTGCCAGATACCAATGTTAATGCATTAACCAGAGACCACAAAACAGCCCTTGATATTGCTGAAAATCTTCCCCTCTCTGAAGAATCGTCAGAAATAAAGGACTCTCTCACTCGATGGGGGGCACTTAGAGCTAATGAGCTCAATCAACCGAGGGATGAACTGAGGAAAACTGTTACTCAAATTAAGAAAGATGTTCACACCCAGCTTGAACAAACCAAGAAAACCAACAAAAATGTTCACAATATTTCCAAAGAGCTAAGAAAACTCCACAGGGAAGGAATTAATAATGCTACAAACTCGGTGACAGTGGTGGCTGTGTTGTTTGCTACGGTTGCTTTTGCTGCTATATTCACTGTGCCTGGTGGGGATTTTGATAGTGGTACTGCAGTGGTTGCAACAGGTACTCCTTTCAAAATCTTCTTCATCTTCAATGCTATTGCACTTTTCACATCTTTGGCTGTTGTGGTTGTTCAAATTACCTTGGTTAGAGGTGAAACTAAAGCCGAGAAAAAGGTGGTGGAGGTGATTAACAAGCTGATGTGGTTGGCTTCTGTGTGTACTTCAGTAGCATTTATTGCATCTTCTTACATAGTCGTCGGTCAGAAGAACAAGTGGGCTGCGATTCTGGTTACAGTAGTTGGAGGAGTCATAATATCTGGAGTTATTGGGACAATGACCTACTATGTAGTGAGGTCTAAGAGAATGAGATCAATGAGGAAGAGGGGGAAGAGTACTAGGAGGAGTGGATCCAACTCATGGCATCATTCTGATTTTTCGAACTCGGAGGTTGATCCAATTTATGCTATTTGA 1728 0.4282 MTPTFNNPLSEISPSPSPSSATAPALVLSNSGKRIDQTGKKKYVKQVTGRHNDTELHLAAQRGDVGAVKQILLDIGSQIMGTVNDDGGDGDVDDLKAEIAEVRASVVNEENELGETPLFTAAEKGHLDVVKELLNYSTNETVSKKNRSGFNPLHIAASQGHHAIVQVLLDYDPGLSKTIGPSNATPLITAATRGHTEVVNELLSKDSSLLEIARSNGKNALHLAARPGHVDIVKALLIKDPQLARRTDKKGQTALHMAVKGQSCDVVKLLLEADAAIVMLPDKFGNTALHVATRKKRVEIVNELLNLPDTNVNALTRDHKTALDIAENLPLSEESSEIKDSLTRWGALRANELNQPRDELRKTVTQIKKDVHTQLEQTKKTNKNVHNISKELRKLHREGINNATNSVTVVAVLFATVAFAAIFTVPGGDFDSGTAVVATGTPFKIFFIFNAIALFTSLAVVVVQITLVRGETKAEKKVVEVINKLMWLASVCTSVAFIASSYIVVGQKNKWAAILVTVVGGVIISGVIGTMTYYVVRSKRMRSMRKRGKSTRRSGSNSWHHSDFSNSEVDPIYAI 575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal24g0226 575 ProSiteProfiles Ankyrin repeat profile. 250 282 IPR002110 GO:0005515
Lal24g0226 575 ProSiteProfiles Ankyrin repeat region circular profile. 148 170 - -
Lal24g0226 575 ProSiteProfiles Ankyrin repeat region circular profile. 51 79 - -
Lal24g0226 575 ProSiteProfiles Ankyrin repeat profile. 51 79 IPR002110 GO:0005515
Lal24g0226 575 ProSiteProfiles Ankyrin repeat profile. 148 170 IPR002110 GO:0005515
Lal24g0226 575 Coils Coil 92 112 - -
Lal24g0226 575 Pfam Domain of unknown function 398 504 IPR026961 -
Lal24g0226 575 Pfam Ankyrin repeats (3 copies) 248 313 IPR002110 GO:0005515
Lal24g0226 575 Pfam Ankyrin repeats (3 copies) 182 239 IPR002110 GO:0005515
Lal24g0226 575 Pfam Ankyrin repeats (3 copies) 56 174 IPR002110 GO:0005515
Lal24g0226 575 ProSiteProfiles Ankyrin repeat region circular profile. 216 237 - -
Lal24g0226 575 SUPERFAMILY Ankyrin repeat 56 329 IPR036770 -
Lal24g0226 575 MobiDBLite consensus disorder prediction 1 23 - -
Lal24g0226 575 ProSiteProfiles Ankyrin repeat region circular profile. 113 139 - -
Lal24g0226 575 PANTHER CASKIN 20 569 - -
Lal24g0226 575 ProSiteProfiles Ankyrin repeat profile. 113 145 IPR002110 GO:0005515
Lal24g0226 575 Gene3D - 175 375 IPR036770 -
Lal24g0226 575 PANTHER ANKYRIN REPEAT PLANT-LIKE PROTEIN 20 569 - -
Lal24g0226 575 Gene3D - 31 173 IPR036770 -
Lal24g0226 575 ProSiteProfiles Ankyrin repeat profile. 216 248 IPR002110 GO:0005515
Lal24g0226 575 MobiDBLite consensus disorder prediction 544 563 - -
Lal24g0226 575 ProSiteProfiles Ankyrin repeat region circular profile. 250 277 - -
Lal24g0226 575 SMART ANK_2a 182 211 IPR002110 GO:0005515
Lal24g0226 575 SMART ANK_2a 250 279 IPR002110 GO:0005515
Lal24g0226 575 SMART ANK_2a 113 142 IPR002110 GO:0005515
Lal24g0226 575 SMART ANK_2a 216 245 IPR002110 GO:0005515
Lal24g0226 575 SMART ANK_2a 148 177 IPR002110 GO:0005515
Lal24g0226 575 SMART ANK_2a 284 314 IPR002110 GO:0005515
Lal24g0226 575 SMART ANK_2a 51 80 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal24g0226 Lal-Chr24 1647403 1658329 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal24g0226 7 575 Miscellaneous Gene Families AT3G12360 79.825 0.0 924
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal24g0226 - - lang:109354482 979.548
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal24g0226 24 1647403 1658329 Lal24g0226 24 1647403 1658329 ECH
Lal24g0226 24 1647403 1658329 Lal5g1200 5 14772205 14774663 ECH