Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal24g0200 ATGGGAGTTAAACAACATGAAGGACTTTCTGAAGACAATGAGCCTGCTGGAGATGCTTGTGCCAGTAGTTCTTTGAACCAGCAGGGTTTTGTGAGTCTCTCTGAAGTTAGCAATCCAATTGAAAATAGTCAAAGCAGTGAAGTTAATGAACCTGGTGGTGTTTCTTGTAAGAAAAGTAATACACCACATTTCTATAGACAAGATGTTGTGAGGAATACTACCAGTGGCTTGATTGGGATTGTGACAGAGGTTGCTGGTGATTCAGATTCGGATAGCAGCATTACTGATGATGAGGACGATAGTGAAGATGAGGATGCAGATTTTGAGGAAGAGAATGTTGATGACAGTAACAATGCTAGTAGAAATTCTGATAAGAATGATGCTGATGGGGATCGTAAAACTGATGCTCTTCTGGCTGACCAGATGCGTGTATTCTGGATTAACGAATCTGAATCCACCCAAAATTTCAATGATGTAGAAGTTGTTGATCGGGGATTTTTACATGGGGATTTTGTTGCTGCTGCTTCAGACCCTACTGGGCAAGTGGGTGTGGTGGTTGATGTGAATATGTCTGTGGACCTGTTGGCCTCTGATGGATCTATAATAAAAGATATCTCATCAAAAAACTTAAAACGTATTAGGGATTTCACTGTTGGTGATTATGTCGTGCTTGGGTCTTGGCTAGGAAGAATTGATGATGTTTTAGATAATGTGACTGTCTTATTTGATGATGGTTCAGTGTGTAAAGTCACCAAAGCAGACCCATTGAATCTTAAACCTGTATCTAAGAATATTTTTGAAGATGGGCACTTCCCTTATTACCCAGGGCAACGTGTAAGGGCTAGCTCTTCATCAGTTTTCAAGAATTCAAGATGGCTGTCTGGCTTGTGGAAAGCTAGTAGGTTGGAAGGTACTATCACTAAGGTTACAGTAGGATCAGTGTTTGTTTATTGGATATCATCTGCAGGTTATGGGCCATACTCTTCTAGTTCCCCAGCTGAAGAGCAGAGCCCGAAAAACTTAAAATTACTGTCTTGTTTTTCTCATGCAAATTGGCAATTGGGTGACTGGTGTCTCTTTCCCTCATCGACACTGTCATCCTCAATTTCCATGGATAAAGGCATATCAAAATTAGAACTTAACAATTCTGTTAACAATGAAAAAGACTCTAATCAGACAGGAAGTGGGTGTGATTTGGAAGAAGTTACAGCTGAAGAATTAAATGGGAATAAGGATCCCATGGACCTTGATCCAGTGGATGCTTTGGATGGGAATGATGGAAATGTTGTAAGTAACCCTTCACGTGATTCAAGCTCATGTGGTAGTTCTTCTATGTCAGTATCGAAGGACCCTGTCCATGAAACCTGGCCTCTTCACCGCAAGAAAATAAGGAAAGTTGTCATCAGGAAAGAAAAAAAGGTCCGAAAGAAAGAGGAAAGTTTTGAGAAAGCTCTTTTGATTGTCAACACAAGGACAAAAGTTGATGTTGCATGGCAGGATGGAGTAATAGAGCGCAAACGGGATTCTATAAGATTGATTCCTACAGATAATCTTGGTGATCATGAATTTGTCGCAGAACAATATGTGGTAGAGAAGACCTCTGATGATGGTATGGATATTTGTGAAACTAGGCGTGTTGGGGTGTTGAGAAGTGTTAATGCCAAGGAGCGGACAGCTTGTGTGAAGTGGTTAAAACCAGTTGACCGACCAGAAGATCCTCGAGAGTTTGACAAGGAAGAAGTGGTAAGTGTGTATGAGCTGGAAGGACATCCAGATTATGATTACTGCTATGGGGATGTTGTTGTTCGGTTATCGCCTGTGTCTGTCTGTTTAGAAACAGCTTCTGCTGGAGAGTCCATTGAGCAATCAAAGCAGAAAAATGAAGATTGTGGGATTAAAAAAGAAACAAAAATCCGAACAGGTACCAGTAAAGGAGAAAATGCATCTGCTGGTGAAACTTGTGAGGAGTTCTCAGACCTCTCTTGGGTAGGAAATATAACTGGTCTTATGAATGGTGATATTGAAGTTACTTGGGCTGATGGAATGGTGTCAACGGTTGGACCCCAAGCAATCTATGTTGTTGGTCGAGATGATGATGATGAATCAATTGCTGCTGGAAGTGATATAAGTGATGCTGCAAGCTGGGAAACTGTTAATGATGATGAAATGGAAGTCGTCGAGGAATCCAAAGAGGAAAATGATGTGCAGAATATTGAGAGGGAAAATTCAAGCAGCGTCACTTCTGAGACAGAAGAGAGCGGAGAGAATGACTTTGTTAGGGCCGCAGCACTTGCTGTTCCCCTAGCAGCATTTCGTTTCGTCACCAGACTTGCCACTGGAATATTCTCAAGGGGCCAAAGGAACTTAGATCTTGTTCACTTGCAGCCAAAAGATGAAAGTGAACATCCATCACGTGATGAGTCTATTTCTCAGAAATCTATTGCTATTGATGGTGAAAGTTCAGGCAATATGAGTGGAAGAAATGAGGAAGTCATTCCAGAGTCATCTGAAATTTTGGAAGCATGTGAGGCATTGTGTAGCTTGAGGAATGAAGACGCTCCAGCAAGTTACGATGATGGTGCTTGCAGTTTCAAACACTTTGATATAACTAAAGATCCTTCAGACCATTATTATACTGGTACAAATGGACAGAGTAACAACCGAAAATGGTTTAAGAAGGTTCAACAAGATTGGACCATATTGCAGAATAACCTTCCTGAGGAAATTTATGTACGAGTTTATGAAGATAGAATGGATCTCTTGAGAGCAGTTATTGTTGGGCCATATGGAACCCCTTACCAAGATGGACTTTTTTTCTTCGATTTTCACCTTCCACCAGAGTACCCAGACGTTCCACCGTCGGCTTACTATCACTCTGGTGGTTGGCGTGTTAACCCTAATTTATATGAGGAAGGGAAGGTGTGCCTTAGCCTTCTAAATACATGGACAGGTAGAGGAAATGAAGTATGGGATCCAAAATCGTCTAGCATCCTTCAAGTCCTAGTTTCGCTGCAAGGCTTAGTGCTCAACTCTAAGCCTTACTTCAATGAAGCTGGTTATGATAAGCAGGTTGGAACAGCTGAAGGGGAGAAGAATTCATTGTCATACAATGAGAATACATTTCTACTTAACTGCAAGACTATGATGTATCTCATGAGGAAACCCCCAAAGGACTTTGAAGTGCTCGTCAAAGAACATTTTAAGGGGCGTGGTCATAACATCCTGAAGGCTTGTGATGCATATATGAAAGGTCATTTGATTGGCACACTGACTAAAGACGCCTCGATAAGTGACAAGAGCATTCAGAATTCAACCTCTGTAGGTTTCAAACTGATGTTGGCCAAGATCGTGCCAAAGCTTTACCTCTCGCTGAGTGAGCTTGGAGCTGAGTGTGAGGAATTTAAACATTTGAAAGAGTTGTAA 3423 0.4143 MGVKQHEGLSEDNEPAGDACASSSLNQQGFVSLSEVSNPIENSQSSEVNEPGGVSCKKSNTPHFYRQDVVRNTTSGLIGIVTEVAGDSDSDSSITDDEDDSEDEDADFEEENVDDSNNASRNSDKNDADGDRKTDALLADQMRVFWINESESTQNFNDVEVVDRGFLHGDFVAAASDPTGQVGVVVDVNMSVDLLASDGSIIKDISSKNLKRIRDFTVGDYVVLGSWLGRIDDVLDNVTVLFDDGSVCKVTKADPLNLKPVSKNIFEDGHFPYYPGQRVRASSSSVFKNSRWLSGLWKASRLEGTITKVTVGSVFVYWISSAGYGPYSSSSPAEEQSPKNLKLLSCFSHANWQLGDWCLFPSSTLSSSISMDKGISKLELNNSVNNEKDSNQTGSGCDLEEVTAEELNGNKDPMDLDPVDALDGNDGNVVSNPSRDSSSCGSSSMSVSKDPVHETWPLHRKKIRKVVIRKEKKVRKKEESFEKALLIVNTRTKVDVAWQDGVIERKRDSIRLIPTDNLGDHEFVAEQYVVEKTSDDGMDICETRRVGVLRSVNAKERTACVKWLKPVDRPEDPREFDKEEVVSVYELEGHPDYDYCYGDVVVRLSPVSVCLETASAGESIEQSKQKNEDCGIKKETKIRTGTSKGENASAGETCEEFSDLSWVGNITGLMNGDIEVTWADGMVSTVGPQAIYVVGRDDDDESIAAGSDISDAASWETVNDDEMEVVEESKEENDVQNIERENSSSVTSETEESGENDFVRAAALAVPLAAFRFVTRLATGIFSRGQRNLDLVHLQPKDESEHPSRDESISQKSIAIDGESSGNMSGRNEEVIPESSEILEACEALCSLRNEDAPASYDDGACSFKHFDITKDPSDHYYTGTNGQSNNRKWFKKVQQDWTILQNNLPEEIYVRVYEDRMDLLRAVIVGPYGTPYQDGLFFFDFHLPPEYPDVPPSAYYHSGGWRVNPNLYEEGKVCLSLLNTWTGRGNEVWDPKSSSILQVLVSLQGLVLNSKPYFNEAGYDKQVGTAEGEKNSLSYNENTFLLNCKTMMYLMRKPPKDFEVLVKEHFKGRGHNILKACDAYMKGHLIGTLTKDASISDKSIQNSTSVGFKLMLAKIVPKLYLSLSELGAECEEFKHLKEL 1140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal24g0200 1140 MobiDBLite consensus disorder prediction 82 132 - -
Lal24g0200 1140 MobiDBLite consensus disorder prediction 408 453 - -
Lal24g0200 1140 MobiDBLite consensus disorder prediction 1 65 - -
Lal24g0200 1140 MobiDBLite consensus disorder prediction 90 113 - -
Lal24g0200 1140 MobiDBLite consensus disorder prediction 114 132 - -
Lal24g0200 1140 PANTHER (E3-INDEPENDENT) E2 UBIQUITIN-CONJUGATING ENZYME 57 1138 - -
Lal24g0200 1140 CDD UBCc 892 1042 IPR000608 -
Lal24g0200 1140 ProSiteProfiles Ubiquitin-conjugating (UBC) core domain profile. 889 1049 IPR000608 -
Lal24g0200 1140 MobiDBLite consensus disorder prediction 427 450 - -
Lal24g0200 1140 MobiDBLite consensus disorder prediction 795 829 - -
Lal24g0200 1140 MobiDBLite consensus disorder prediction 809 829 - -
Lal24g0200 1140 SMART ubc_7 892 1049 - -
Lal24g0200 1140 Pfam Ubiquitin-conjugating enzyme 894 1038 IPR000608 -
Lal24g0200 1140 Gene3D Ubiquitin Conjugating Enzyme 860 1120 IPR016135 -
Lal24g0200 1140 MobiDBLite consensus disorder prediction 17 65 - -
Lal24g0200 1140 MobiDBLite consensus disorder prediction 728 755 - -
Lal24g0200 1140 PANTHER UBIQUITIN-CONJUGATING ENZYME E2 23-RELATED 57 1138 - -
Lal24g0200 1140 SUPERFAMILY UBC-like 870 1056 IPR016135 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal24g0200 Lal-Chr24 1458306 1466015 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal24g0200 148 364 Miscellaneous Gene Families AT2G33770 36.697 8.49e-48 183
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal24g0200 K10581 - gmx:100809513 1705.26
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal13g0239 13 1511445 1520014 Lal24g0200 24 1458306 1466015 LSH