Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal24g0187 ATGGGAGTTGTTACTGTTGGTGAATTGAAGCCAAGCATGTCAGGGAAGAGAACCTTTCGTCCAAGTTCAAGCATAAGGCATGCCACTGAATGGCCAATGTCCGACGTGTCTACTGATCTTACCATCGAAATAGGAGCTTCAAGCTTTGCTCCTCACAAGTTTCCTCTAGTTTCTCGGAGTGGAAGAATTAGAAAACTGCTGTTAGAAGCGAAAGATTCCAAAGTTTCACGCATAAGTCTCCCAAGTGTGCCAGGTGGTGCAGAAGCATTTGAGCTAGCAGACAAATTCTGTTATGGAGCTAGCGTCGAGTTCACCCTCTCGAATGTTGCTATGCTCAGATGTTTAGCACAGTTTCTGGACATGACAGAAGAATATGCAGAGAAAAACCTGGTGACAAGAGCTGAAGCATATCTAAAGGACACAGTCCTACCAAGTATACCAAACACAATATCTGTTCTTCACCATTGTGAAACTCTTCTGCCATATTCGGAAGAGATTAATCTTGTTAGCAGGCTAATCAATGCAATTGCAAATAATGCATGCAAAGAGCAACTTACCTCTGGCTTGTTAAAACTAGACCACAACTTCCGTTCTAAAACCATCTCAAACATGGAACCAGAAATACCCTCAGATTGGTGGGGGAAATCACTCAGTGTTCTTAGTCTTGATTTCTTCAAAAGAGTTTTAACTGCAGTTAAATCAAAGGGACTAAAACAAGACATGATCAGCAAGATTTTGATAAACTATGCACATAATTCTCTTCATGGGATTGTTGGTAGGGACCCTCAAACAGTTAAAGGAAGTTTGCTTGACATAGAATTTCAGAAGAAACAAAGGGTCATTGTTGAAGCCATAGTTAGCTTATTACCAACACAATCAAGGAAAAGTCCAGTTCCAATGGCATTTCTCTCAAGTTTGTTCAAAGCTGCAATAGCAGCATCGGCATCTACGAAATGCAGGTCTGATTTGGAGAGGAGGATTGGTCTACAGCTTGACCAGGCAATTCTTGAAGACATTCTAATTCCAACAAACTCACAACATCAAAATACACATAGTACAATGTATGATACTGATTCAATATTGAGGATTTTTTCAATCTTCCTGAATTTGGATGATGAGGATGAGATTGATAGCCGGTTGAGAGATGAAAGTGAAATGATTTATGACTTTGATAGCCCTGGATCACCAAAACAAAGTTCAATTCTAAAGGTATCCAAATTGTTGGACAATTATCTTGCTGAAGTGGCACTAGACTCAAACTTGTTGCCATCAAAGTTCATATCACTTGCGGAACTGCTTCCAGATCATGCTCGTGTTGTAAGTGATGGACTGTACAGAGCAGCTGATATCTTCCTTAAGGTTCATCCAAACATAAAGGACTCAGAACGTTACCGCTTATGTAAAAGTATAGATTGCCAGAAACTGTCTCAAGAAGCATGCAGCCATGCAGCACAAAATGAAAGGCTGCCAGTGCAAATGGCAGTGCAGGTTCTCTACATTGAGCAAATCAGGCTCCGCAATGCTATGAATGGAGGCCACAATCAACTATTCTTTGGTGGACTTAATAATCAATTTCCTCAACGTTCAGGGAGCGGTGCAGGGAGTGGAGCCATTTCCCCTAGAGATAACTATGCATCAGTAAGAAGAGAGAACCGAGAGCTGAAGCTTGAAGTAGCAAGAATGAGAATGAGACTCACTGACTTGGAGAAAGATCATGTTACTATGAAGCAGGAGCTTGTAAGGTCACATCCTGCTAACAAGTTATTTAAATCATTCACCAGGAAACTAAGCAAGCTTAATGCTCTATTCCGGATAAATAGCTATAAGCCAAATGGTGCTTGTTCAGAGAGTAGGTTCCCTTTTGCAAAGAGAAGGCATCACTCAGTTTCATGA 1893 0.4094 MGVVTVGELKPSMSGKRTFRPSSSIRHATEWPMSDVSTDLTIEIGASSFAPHKFPLVSRSGRIRKLLLEAKDSKVSRISLPSVPGGAEAFELADKFCYGASVEFTLSNVAMLRCLAQFLDMTEEYAEKNLVTRAEAYLKDTVLPSIPNTISVLHHCETLLPYSEEINLVSRLINAIANNACKEQLTSGLLKLDHNFRSKTISNMEPEIPSDWWGKSLSVLSLDFFKRVLTAVKSKGLKQDMISKILINYAHNSLHGIVGRDPQTVKGSLLDIEFQKKQRVIVEAIVSLLPTQSRKSPVPMAFLSSLFKAAIAASASTKCRSDLERRIGLQLDQAILEDILIPTNSQHQNTHSTMYDTDSILRIFSIFLNLDDEDEIDSRLRDESEMIYDFDSPGSPKQSSILKVSKLLDNYLAEVALDSNLLPSKFISLAELLPDHARVVSDGLYRAADIFLKVHPNIKDSERYRLCKSIDCQKLSQEACSHAAQNERLPVQMAVQVLYIEQIRLRNAMNGGHNQLFFGGLNNQFPQRSGSGAGSGAISPRDNYASVRRENRELKLEVARMRMRLTDLEKDHVTMKQELVRSHPANKLFKSFTRKLSKLNALFRINSYKPNGACSESRFPFAKRRHHSVS 630
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal24g0187 630 Gene3D Potassium Channel Kv1.1; Chain A 22 143 IPR011333 -
Lal24g0187 630 PANTHER OS12G0117600 PROTEIN 25 623 IPR043454 -
Lal24g0187 630 Coils Coil 544 578 - -
Lal24g0187 630 PANTHER BTB/POZ DOMAIN-CONTAINING PROTEIN SETH6 25 623 - -
Lal24g0187 630 Pfam BTB/POZ domain 37 123 IPR000210 GO:0005515
Lal24g0187 630 ProSiteProfiles BTB domain profile. 38 106 IPR000210 GO:0005515
Lal24g0187 630 Pfam NPH3 family 211 480 IPR027356 -
Lal24g0187 630 SUPERFAMILY POZ domain 21 123 IPR011333 -
Lal24g0187 630 ProSiteProfiles NPH3 domain profile. 211 504 IPR027356 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal24g0187 Lal-Chr24 1339462 1343685 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal24g0187 1 454 EF-hand Containing Proteins AT2G47860 58.230 0.0 528
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal24g0187 - - zju:107406883 1048.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal24g0187 24 1339462 1343685 Lal24g0187 24 1339462 1343685 ECH
Lal5g0287 5 2557788 2562630 Lal24g0187 24 1339462 1343685 PCT
Lal24g0187 24 1339462 1343685 Lal5g0287 5 2557788 2562630 PCT