Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal24g0142 ATGGAACCAAATGTTTTAGCACAAAGCAGGAGTTCAACACTATGTTTAGCTCAATGGAAGCTCACACGTAAATCAAAGCAACCCTGTGTTGTTGGAGTTCTCACAAGGCCTGCAACAGGAGAAGCAGCCGAAACTAATGTGTACAAAGATAGCTGGTTTGACCATATAGCTATAAACCATTTATCAAAAAGCATTCAAGCAGCAACAGGACTCAGTAACAGTAAGAGTGGATATGAGAGCCTGGTTGAGGCATCTACTATGGCTTCAAAGGAATTTAATCATATTGAACAACAACAAGTTGTTATTGAAGCACTTGACAGAGCCTTCCCTAGGCCAATACTTTTACTGATAAGGACACTGCTACCACCATCTAAATTTGCAAGGGAATATTTTGCCCTATTCACAACTTTCTTCTTTGCTTGGTTAGTAGGGCCCTCTCAGGTTAGAGAATCAGAGATCAATGGGAGAAGTGAAAAAAATGTAGTCCACATAAAAAAATGCAGGTTTTTAGAAGAGACAAACTGTACAGGCATGTGTATTAATCTCTGCAAAATGCCATCTCAGTCATTTATAAAGGACTCTCTGGGTATGCCAGTAAACATGGTCCCTAATTTTGAAGACATGAGTTGTGAGATGATATTTGGACAGGATCCCCCAGCATCAACTGATGATCCAGCATTGAAGCAACCATGCTATAAACTATGTAATAAACTTACTATTACACTGCTTACATTAATTTACATGCCAACTCTTAAGGCAAGGCAAAGAAAAATCATGCAACGGATTGCCTCAGTTAATGGAGCAGGCTTTCAAGTCAGCAAGGAGTGGAGGGAACAAGAGTACAAGAGTGTCTCCCACTTACTGTATTCTGCCAAAGCTGAGACTCATCAACAATCTTTCTATTTCTCTCATTATAGGAGAATAGATAAATGGTCTAATACCACTATAAGCCTATAA 957 0.3929 MEPNVLAQSRSSTLCLAQWKLTRKSKQPCVVGVLTRPATGEAAETNVYKDSWFDHIAINHLSKSIQAATGLSNSKSGYESLVEASTMASKEFNHIEQQQVVIEALDRAFPRPILLLIRTLLPPSKFAREYFALFTTFFFAWLVGPSQVRESEINGRSEKNVVHIKKCRFLEETNCTGMCINLCKMPSQSFIKDSLGMPVNMVPNFEDMSCEMIFGQDPPASTDDPALKQPCYKLCNKLTITLLTLIYMPTLKARQRKIMQRIASVNGAGFQVSKEWREQEYKSVSHLLYSAKAETHQQSFYFSHYRRIDKWSNTTISL 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal24g0142 318 PANTHER BETA-CAROTENE ISOMERASE D27, CHLOROPLASTIC 36 237 - -
Lal24g0142 318 Pfam Beta-carotene isomerase D27-like, C-terminal 141 221 IPR025114 GO:0005506
Lal24g0142 318 PANTHER BETA-CAROTENE ISOMERASE D27 36 237 IPR038938 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal24g0142 Lal-Chr24 1046966 1050797 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal24g0142 K17911 - gmx:100782912 349.747
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g1913 1 21350261 21354057 Lal24g0142 24 1046966 1050797 PCT
Lal24g0142 24 1046966 1050797 Lal1g1913 1 21350261 21354057 PCT