Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g1913 ATGCACTCTTCCTTTTTATCTAAGCCTCTTTCACCCTTCACCATTCACCTATCAACCTTAAAAACAACATTAATCATTCTTTTTTGTCTCTCACAGAAAATCATAGTGTTCACAAATATGGAAGCAAGATTTTTTGCACTGAACAAAAGTCAAATACTAACTTCAAGTCATTGGAATAAGGTGATCAAATGTAAACCACAACATCCTTTTATTGTTGCAGTGCTCACAAGGCCTTCTTCTTCTTCAGATGACATTGCAGGAGAAACAAGAAAAATAAATGTCTACAAAGATAACTTCTTTGATCTCTTAGCCATAAACCATTTATCAAAAAGTCTTCAAGCAGCTACAGGATTCAGTAACAGTAAGAGTGGTTATGAGAGCTTGACAGAGGCAGCTATTGTGGCTTCACAGAAATTGAATCCTATTCAGCAGAGAGAGGTTGTCATTGAAGCTCTTTACAGAGCTTTCCCAAGGCCAATATTTTCATTAATAAGGAAGGTGGTACCACAATCTAAATTAGGAAGGGAATGTTTTGCTGCCTTCACCTCTCTCTTCTTTCTTTGGTTAGTTGGCCCATCCGAGGTGAGAGAATCAGAGATGAATGGAAGAAGAGAAAAGAATGTTGTGTACATCAAAAAATGCAGGTTTTTAGAGGAGGGAAATTGTATAGGGATGTGTACTAATCTTTGCAAAATACCATCTCAATCATTTATAAAGGACTCTTTGGGTATGCCACTCAACATGGTCCCTAATTTTGATGACATGAGTTGTGAGATGATATTTGGGGTTGATCCTCCACCATTATCTGATGATCCAGCACTGAAGCAACCATGCTATAAACTATGCAATGTAAAGAAAAAGCATGGAATGAACTGCCTCAATTAA 885 0.3718 MHSSFLSKPLSPFTIHLSTLKTTLIILFCLSQKIIVFTNMEARFFALNKSQILTSSHWNKVIKCKPQHPFIVAVLTRPSSSSDDIAGETRKINVYKDNFFDLLAINHLSKSLQAATGFSNSKSGYESLTEAAIVASQKLNPIQQREVVIEALYRAFPRPIFSLIRKVVPQSKLGRECFAAFTSLFFLWLVGPSEVRESEMNGRREKNVVYIKKCRFLEEGNCIGMCTNLCKIPSQSFIKDSLGMPLNMVPNFDDMSCEMIFGVDPPPLSDDPALKQPCYKLCNVKKKHGMNCLN 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g1913 294 PANTHER BETA-CAROTENE ISOMERASE D27 48 291 IPR038938 -
Lal1g1913 294 Pfam Beta-carotene isomerase D27-like, C-terminal 188 269 IPR025114 GO:0005506
Lal1g1913 294 PANTHER BETA-CAROTENE ISOMERASE D27, CHLOROPLASTIC 48 291 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g1913 Lal-Chr1 21350261 21354057 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g1913 K17911 - qsu:112034272 342.428
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g1913 1 21350261 21354057 Lal24g0142 24 1046966 1050797 PCT
Lal24g0142 24 1046966 1050797 Lal1g1913 1 21350261 21354057 PCT