Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal24g0089 ATGCCTATGACTCTGAACAACAGCAACAACAATAGTAATGGCAGTTCCACTTCTTTGTTCTCTGTTCCCACATTGTTCCTCCTCTTCATACTTCTCTCCATTCTCTCTTTCTCTTTCTTCTTCTTCTTCTCCTTCTCTTCCTCCACCTCTCACCTTTCATCTTTCTCTCTTCAATCTTCTTCTTCTTCTTCTTCCTCCATCAATGTCTACGTCGCTGACCTCCCCAGATCCCTCAATTACGACCTCCTCCACCGTTATTGGTCCATCAACTCCGATTCTCGTCTTCCCACCGACCCAGATAGTGAAATCCGATCTACCAACATTTCCAAAACCCTAGATTTCCCACCCTACCCTGAGAACCCATTGATCAAGCAGTACAGCGCGGAGTACTGGATTATGGGGGATCTTATGACTCCACCTCAATTGCGAACTGGGTCGTTCTCAAAACGGGTTTTTGATGCACTTGACGCTGATGTGGTGTTTGTGCCATTCTTCGCTACTCTCAGTGCTGAATTGCAATTGGGAATAGCCAAAGGGGTGTTTAGAAAGAAGGTTGGTAATGATGATCACTTGAGGCAGAGGGAAGTTATGGATTTTGTGAAGAATACCCAGTCTTGGAAGCGTTCTGGTGGACGAGATCACGTCTTTGTCCTCACTGGTAGTGGTAGTGCCATTTTTTTGGCCCAAATAGGGAAAAAATTCTATCCATTTGCTTTTGATGCCCTGGTTATCTTAAAACTGAAGCATTCTTTGGCAGACCCAGTCGCAATGTGGCATGTTAAAGATGAGATTGCTCCAGCTGTTCTCCTTGTCGTGGATTTTGGTGGTTGGTACAGACAGGACTCTAAATCATCCAACTGTAGCTCATCCGAAATGATGATTCAGCACACCCAAGTTTCTGTTCTTAAAGATGTGATTGTTCCATACACACATCTACTTCCCAGGCTGCGCTTGTCAGAAAATCAGGAGCGCCACAGCCTTCTGTATTTTAAAGGGGCTAAACATAGGCATCGGGGAGGCCTAGTCAGAGAGAAGTTATGGGATATGTTGATTAATGAGCCCGGTGTTATAATGGAGGAAGGCTTCCCTAATGCCACCGGGCGAGAGCAATCAATAAGAGGGATGAGGGCATCTGAGTTTTGCCTGCACCCAGCTGGAGATACACCCACTTCATGCCGACTTTTTGATGCCATTCAAAGTCTTTGTATACCTGTAATTGTAAGCGACGGCATTGAGCTCCCATTTGAAGGTATGGTGGATTATTCAGAATTTTCGGTCTTTGTGGCGGTTGGTGATGCATTGAAACCAAGCTTGCTAGTCAATCATCTTAAAAGTTTCTCAAAAGCGCAGATAGACAAGTTCCGTCAAAATATGGCTCGGGTACAGCCCATATTTGTGTATGACAATGGTCATCCTGGTGGTATTGGACCAATACCCTTGGATGGTGCAGTGAATCACATATGGAAGAAAGTTCACCAAAAACTGCCCATGATTAAAGAAGCCATAATTCGAGAGAAAAGAAAACCAGCAGGTGTTTTAGTTCCACTCCGTTGTCACTGTACTTGA 1566 0.4476 MPMTLNNSNNNSNGSSTSLFSVPTLFLLFILLSILSFSFFFFFSFSSSTSHLSSFSLQSSSSSSSSINVYVADLPRSLNYDLLHRYWSINSDSRLPTDPDSEIRSTNISKTLDFPPYPENPLIKQYSAEYWIMGDLMTPPQLRTGSFSKRVFDALDADVVFVPFFATLSAELQLGIAKGVFRKKVGNDDHLRQREVMDFVKNTQSWKRSGGRDHVFVLTGSGSAIFLAQIGKKFYPFAFDALVILKLKHSLADPVAMWHVKDEIAPAVLLVVDFGGWYRQDSKSSNCSSSEMMIQHTQVSVLKDVIVPYTHLLPRLRLSENQERHSLLYFKGAKHRHRGGLVREKLWDMLINEPGVIMEEGFPNATGREQSIRGMRASEFCLHPAGDTPTSCRLFDAIQSLCIPVIVSDGIELPFEGMVDYSEFSVFVAVGDALKPSLLVNHLKSFSKAQIDKFRQNMARVQPIFVYDNGHPGGIGPIPLDGAVNHIWKKVHQKLPMIKEAIIREKRKPAGVLVPLRCHCT 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal24g0089 521 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 22 219 IPR004263 GO:0006486|GO:0016757
Lal24g0089 521 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 251 511 IPR004263 GO:0006486|GO:0016757
Lal24g0089 521 PANTHER EXOSTOSIN FAMILY PROTEIN 22 219 - -
Lal24g0089 521 PANTHER EXOSTOSIN FAMILY PROTEIN 251 511 - -
Lal24g0089 521 Pfam Exostosin family 65 441 IPR040911 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal24g0089 Lal-Chr24 588563 591406 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal24g0089 - - adu:107467786 721.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal24g0089 24 588563 591406 Lal24g0089 24 588563 591406 ECH
Lal13g0094 13 608375 611280 Lal24g0089 24 588563 591406 LSH