Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal13g0094 ATGGCTCTAATGATGAAGAACAACAACAATGGCATTTCCACTTGTTTGTTTTCTATTCACACACTGTTCATCCTCTTCACACTTCTCTCCATTCTCTCCATCACTTTCTTCTTCCCCTTCTCTATTTCTCACCTTTCCTCAAACCCCTCTTTCTCTCTTCCATCTTCTTCCTCCATCAATGTCTATGTCGCCGACCTTCCCAGATCCCTCAACTACGACCTCCTCCACCGTTATTGGTCCTTCAACTCCGATTCCCGTCTCGGCAGTGACGCTGACCTTGAAATCCGATCCACCCACATTTCCAAAACCCTAAAATTCCCACCTTACCCTCACAACCCATTGATCAAGCAGTACAGTGCGGAGTACTGGATCATGGGGGATCTTATGACTCCGCCGGAGATGCGAACTGGGTCCTTTGCAAAACGTGTTTTTGATGCACGTGATGCAGATGTTGTATTTGTTCCCTTCTTTGCTACTCTCAGTGCTGAATTGCAGTTGGGTATAGCCAAAAGGGTGTTCAGGAAGAAGGTTGGTAATGATGATTACTCGAGGCAGAGGGAGGTTATGGATTTTGTGACCAATACCGAGGCTTGGAAGCGTTCTGGTGGAAGAGATCACGTGTTTGTGCTCACTGACCCAGTCGCAATGTGGCATGTTAAAGATGAAATTGCCCCAGCTATTCTCCTTGTCGTGGATTTTGGTGGTTGGTACAGACAGGACTCTAAATCATCCAACTCTACCTCATCTGAAATGATTCAACACACCCAAGTTTCTGTACTTAAAGATGTGATCATTCCATACACGCATCTACTTCCCAGGCTGCACTTGTCAGAAAACCAGGAGCGCCATAACCTCCTGTATTTCAAAGGAGCTAAACATAGGCACCGGTCATACAAGAGTTGTTGGTCCCAGCTAGTGGGACTAAGGCTTGCTTGTTGTAGAAGTCATACAAGAGATGGAGGACTTGTCAGAGAGAAGTTATGGGATCTATTGATTAATAAGCCCGGAGTTATAATGGAGGAAGGCTTCCCTAATGCCACTGGGCGAGAGCAATCCATAAGAGGGATGAGGACATCTGACTTTTGCCTGCACCCAGCTGGGGATACACCCACATCATGCCGACTTTTTGATGCCATTCAAAGCCTTTGTATACCTGTTATTGTAAGTGACAACATTGAGCTCCCATTTGAAGGTATGGTGGATTATTCAGAATTTTCAGTCTTTGTGGCAGTTAGTGATGCACTGAAACCAGACTGGCTAGTTGATCATCTTCAAAAAATTCCAAAAGAGCGGAAAGACGATTTCCGCCTAAACATGGCTCGTGTACAGCCCATCTTTGTGTATGATAATGGTCATCCCAGTGGTATTGGACCGATACCTTTGGATGGTGCAGTGAATCATATATGGAAGAAAGTTCACCAAAAACTGCCCCTGATTAAAGAAGCCATACTTCGAGAGAAAAGAAAACCCCCGGGTGTTTTGGCTCCACGTCGCTGTCATTGTACTTGA 1509 0.4546 MALMMKNNNNGISTCLFSIHTLFILFTLLSILSITFFFPFSISHLSSNPSFSLPSSSSINVYVADLPRSLNYDLLHRYWSFNSDSRLGSDADLEIRSTHISKTLKFPPYPHNPLIKQYSAEYWIMGDLMTPPEMRTGSFAKRVFDARDADVVFVPFFATLSAELQLGIAKRVFRKKVGNDDYSRQREVMDFVTNTEAWKRSGGRDHVFVLTDPVAMWHVKDEIAPAILLVVDFGGWYRQDSKSSNSTSSEMIQHTQVSVLKDVIIPYTHLLPRLHLSENQERHNLLYFKGAKHRHRSYKSCWSQLVGLRLACCRSHTRDGGLVREKLWDLLINKPGVIMEEGFPNATGREQSIRGMRTSDFCLHPAGDTPTSCRLFDAIQSLCIPVIVSDNIELPFEGMVDYSEFSVFVAVSDALKPDWLVDHLQKIPKERKDDFRLNMARVQPIFVYDNGHPSGIGPIPLDGAVNHIWKKVHQKLPLIKEAILREKRKPPGVLAPRRCHCT 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal13g0094 502 Pfam Exostosin family 57 422 IPR040911 -
Lal13g0094 502 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 318 492 IPR004263 GO:0006486|GO:0016757
Lal13g0094 502 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 19 298 IPR004263 GO:0006486|GO:0016757
Lal13g0094 502 PANTHER EXOSTOSIN FAMILY PROTEIN 318 492 - -
Lal13g0094 502 PANTHER EXOSTOSIN FAMILY PROTEIN 19 298 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal13g0094 Lal-Chr13 608375 611280 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal13g0094 - - adu:107467786 719.924
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal13g0094 13 608375 611280 Lal13g0094 13 608375 611280 ECH
Lal13g0094 13 608375 611280 Lal24g0089 24 588563 591406 LSH