Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal24g0026 ATGGGTAGGCTACTATGCTTTTCTCCTTTGCTAGTTACTCTGCTCTTCCAATTCAGCTATTGCATGCTTGAGCAAGTACCAACACCACCATTGCCAATTCTCCCTCTCCCAACGTATTCACAATTGAAATGGCAACAAAGGGAAATCATCATGTTCCTCCATTTCGGTGTAAACACATTCACTGACAGAGAATGGGGCACTGGCCATGAAAATCCATCTATTTTCAACCCTTCTGCTCTCAACACAACTCAATGGGCAACTGTAGCAGCAGATGCACAAATTTCATTGATGATATTAACTGCAAAACACCATGATGGGTTTTGTCTCTGGCCTTCTAAGTACACTCACCATTCTGTGCTTAGCAGTCCTTGGAAAAGTGGTAAAGGTGATGTTGTTCAAGACTTTCTAGATGCAGCTTCTGCACAAGGTATAGATGCTGGTATTTACCTTTCACCATGGGATAAATATGAACCTAGATATGGTCATGATGTGGCTTACAATGAATATTATTTAGCTCAATTGCAAGAGCTTCTCAATAAGTATGAAAATGTAAGAGAAATATGGTTTGATGGAGCAAAGGATCCAAAGGCAAAAAATGTAACATATTACTTTTCAGAATGGTTTTCAATGGTGAAGGAGTTGCAGAGTTGTATCAATATATTCTCTGATGCTGGTCCTGATGTTAGGTGGGTTGGAGATGAAACAGGAACTGCAGGGAACACATGTTGGTCTACCATTAATAGAACCTCTCTATCAATTGGAAGTCCACACATTACTGCGTATCTAAATAGTGGTGATCCAAGAGGGATAGATTGGCTACCAGCAGAGTGTGATGTTTCAATCAGAAATGGGTGGTTTTGGCATAAGTCAGAGTCACCAAAAAAGCTAAGTGAGCTGCTTGATATTTATTACAACTCTGTTGGTAAAAATTGTTTGTTACTTCTGAACGTGCCTCCTAATTCATCTGGCCTGATATCTAATACTGATGCTAATAGATTAAAAGAATTCAGAAGTGCAATTAACACAATTTTCCATGAGAATGTAGCTGAAAGTTGTTACATTAAAGTAAGTAGCCAAAGAGGGGATTTTGGAGCAGAAAACATGTTAGATAGTGATCACTTGTGGTCATATTGGGCCCCCAAGGAGCATGATAATGAAGAGGACCACTGGATTGAAATATGGGGTAAGGATGAGAATATAAGAAGATTCAATGTGATAAGGATACAAGAAGCAATTGGACTTGGTCAAAGGATAAAAGAGCATGAAATTTATGTGGATGATAAACTTGTTATCCAAGGAACAACAGTGGGTTATAAGAGACTTCACAGGCTTCATGGAGATGAGGTGCATGCACATGTTGTGAGGATCAGAATCACAGAAGCAAGAGGAGTGCCTCTTATTTCTTCTATTGGTTTGCATTTTGATCCTTTCTGGCACTCAAGCTTTACAATGGCCTGA 1458 0.3937 MGRLLCFSPLLVTLLFQFSYCMLEQVPTPPLPILPLPTYSQLKWQQREIIMFLHFGVNTFTDREWGTGHENPSIFNPSALNTTQWATVAADAQISLMILTAKHHDGFCLWPSKYTHHSVLSSPWKSGKGDVVQDFLDAASAQGIDAGIYLSPWDKYEPRYGHDVAYNEYYLAQLQELLNKYENVREIWFDGAKDPKAKNVTYYFSEWFSMVKELQSCINIFSDAGPDVRWVGDETGTAGNTCWSTINRTSLSIGSPHITAYLNSGDPRGIDWLPAECDVSIRNGWFWHKSESPKKLSELLDIYYNSVGKNCLLLLNVPPNSSGLISNTDANRLKEFRSAINTIFHENVAESCYIKVSSQRGDFGAENMLDSDHLWSYWAPKEHDNEEDHWIEIWGKDENIRRFNVIRIQEAIGLGQRIKEHEIYVDDKLVIQGTTVGYKRLHRLHGDEVHAHVVRIRITEARGVPLISSIGLHFDPFWHSSFTMA 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal24g0026 485 PRINTS Glycosyl hydrolase family 29 signature 96 112 IPR016286 GO:0004560|GO:0006004
Lal24g0026 485 PRINTS Glycosyl hydrolase family 29 signature 144 163 IPR016286 GO:0004560|GO:0006004
Lal24g0026 485 PRINTS Glycosyl hydrolase family 29 signature 298 319 IPR016286 GO:0004560|GO:0006004
Lal24g0026 485 SUPERFAMILY Galactose-binding domain-like 346 464 IPR008979 -
Lal24g0026 485 PANTHER ALPHA-L-FUCOSIDASE 19 483 IPR000933 GO:0004560|GO:0005975
Lal24g0026 485 PANTHER OS09G0520800 PROTEIN 19 483 - -
Lal24g0026 485 SUPERFAMILY (Trans)glycosidases 30 341 IPR017853 -
Lal24g0026 485 Pfam Alpha-L-fucosidase 72 336 IPR000933 GO:0004560|GO:0005975
Lal24g0026 485 Gene3D - 353 473 - -
Lal24g0026 485 SMART alpha_l_fucos 34 368 IPR000933 GO:0004560|GO:0005975
Lal24g0026 485 Gene3D Glycosidases 32 350 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal24g0026 Lal-Chr24 181105 183023 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal24g0026 K01206 - gmx:100775293 818.535
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal24g0026 24 181105 183023 Lal24g0026 24 181105 183023 ECH
Lal13g0019 13 125310 127108 Lal24g0026 24 181105 183023 LSH