Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal23g1535 ATGAAAGATTCAGATAAAGTAACTTGTGATGAGAGTAGAAACCCTACTCTCATTACTGCACATTCTAGAACCTCACCCTTACCCTCACCAAAACAAATGCTATGCCTCATTCTCTTCGTTTCACTCACCTATGCCATTTACACTCTCAACCTCGTTAAAACTTCCACCGCCTGCAACTACGCCAAAGAACGCATTTCCATCTCTATTGCCATCAATAACGTCACCATGAGAGAAACACAAACCGATCTCCGCCACGTTGTGTTCGGAATCGCAGCCTCGTCCAAACTTTGGGAGCAGAGAAAGAACTACATTAAGCTTTGGTACAAAGCGAAAGAAATGAGAGGAATAGTGTGGCTTGATGATCGTGTCAAAACTGACCGGAAAGAAGGGCTACCGCAGGTGAAAATATCCACCGATACCTCCAATTTCGGTTACACCAATAAGCAGGGTCACCGTTCCGCCATTAGGATATCGCGGATAGTATCAGAAACGCTGCATTTGGGGTTAAAAGATGTGCGGTGGTTTGTAATGGGAGACGATGACACCGTTTTTGTGACCGAGAATTTGTTGAGGGTTTTAAGAAAGTATGATCATAATCAGTTTTATTATATTGGAAGCCTTTCTGAGAGTCATTTGCAGAATATATTCTTCTCATACGGCATGGCGTACGGTGGTGGCGGTTTTGCCATTAGTTATCCATTGGCCAAAGCATTGAGTAAGATGCAGGACCGTTGTATTCACAGGTATCCTGGACTATATGGCTCTGATGATAGAATGCAAGCTTGTATGGCTGAACTCGGTGTTCCACTCACTAAGGAAATCGGTTTTCACCAATATGATGTGTATGGGAACTTGTTGGGGCTTCTTGCAGCTCATCCAGTGACTCCATTAGTATCACTCCACCACCTTGATGTGGTTGAACCAATCTTCCCCAACGCAACTAGGCTTGAAGCTCTTCAACGCCTCACCATACCAATGAAACTTGACTCGGCATCACTCATTCAACAATCCATATGCTACGACAAAAACAACACCTGGACCATTTCAGTTTCATGGGGTTTTGCTGTTCAGATATTCCGTGGAATATTTCCAGCACGTGAGATGGAAATGCCTTCAAGAACATTCTTGAATTGGTATAGAAGAGCTGATTATACAGCATATGCATTCAACACACGACCTGTTAGCAGAAACCCATGTCAGAAGCCTTTTGTGTTTTACTTGTCAAAGGCAGAATTCAATTCTACATTGAAACAGACATTAAGTGAATATGAAAGGCATCGTGTCCCTCATCCAGAATGCCGTTGGATGATGCCTGATCCTTCCGAGGTTGACAAAGTTAAGGTATATAAGAAGCCAGACCCACATCTATGGGATAGAGCTCCAAGGAGAAACTGTTGCAGAGTAATGAAATCAAACAACAAAGGAACAGTGGTGATAGATGTGGGAATATGCAGAGATGGTGAGGTCACCGAAACTTAA 1479 0.432 MKDSDKVTCDESRNPTLITAHSRTSPLPSPKQMLCLILFVSLTYAIYTLNLVKTSTACNYAKERISISIAINNVTMRETQTDLRHVVFGIAASSKLWEQRKNYIKLWYKAKEMRGIVWLDDRVKTDRKEGLPQVKISTDTSNFGYTNKQGHRSAIRISRIVSETLHLGLKDVRWFVMGDDDTVFVTENLLRVLRKYDHNQFYYIGSLSESHLQNIFFSYGMAYGGGGFAISYPLAKALSKMQDRCIHRYPGLYGSDDRMQACMAELGVPLTKEIGFHQYDVYGNLLGLLAAHPVTPLVSLHHLDVVEPIFPNATRLEALQRLTIPMKLDSASLIQQSICYDKNNTWTISVSWGFAVQIFRGIFPAREMEMPSRTFLNWYRRADYTAYAFNTRPVSRNPCQKPFVFYLSKAEFNSTLKQTLSEYERHRVPHPECRWMMPDPSEVDKVKVYKKPDPHLWDRAPRRNCCRVMKSNNKGTVVIDVGICRDGEVTET 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal23g1535 492 Gene3D - 73 328 - -
Lal23g1535 492 Pfam Protein of unknown function, DUF604 213 466 IPR006740 -
Lal23g1535 492 PANTHER TRANSFERRING GLYCOSYL GROUP TRANSFERASE 20 490 - -
Lal23g1535 492 PANTHER FRINGE-RELATED 20 490 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal23g1535 Lal-Chr23 15493807 15497349 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal23g1535 28 491 Glycosyltransferase AT4G23490 69.574 0.0 716
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal23g1535 - - gmx:100818244 779.245
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal23g1535 23 15493807 15497349 Lal23g1535 23 15493807 15497349 ECH
Lal23g1535 23 15493807 15497349 Lal16g1198 16 8252911 8257363 PCT