Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g1198 ATGAAAGTTTCACTCAAAGATTCAGAGAAACTAATTTGGGAACAGATGAGAACCCCAACTTCTGGTTCCACCACACATTGCAAAACCTTACCAAAGCTTCTACTTTTACTCATTCTATTCGTTTCTCTCACTTACGTTGTCTACACGCTCAAGCTCGTCTCAGCTTCACGCGCCTGTAACAACGATTCCCCCTTCTTAACCAACACCTTAATCAACTCCAATATCAATGCCACCGCCACCTCCACCTCCACCGTTCTCCGGCGAGAATCTCGCGAAACTCTCCAAACGGAACTCCGGCATGTGGTGTTCGGAATCGCTGCATCAGCGAAGCTTTGGGAGCAGAGAAAGAACTACATCAAGCTATGGTACAAGCCGAAAACGATGAGAGGTGTGGTGTGGCTCGACGAAAACGTGAACACCACCAGCAACAACACGGAGTCTCTGCCGCCGGTGAGGATCTCAGGCGACACGTCACGGTTTTCTTACACAAACCGGCAGGGACACCGTTCAGCGATTCGGATCTCGAGGATCGTTTCAGAGACTCTCGAATTAGGGTTAAAAGATGTTCGTTGGTTCGTAATGGGAGATGATGACACAATTTTTGTAACAGAAAATTTGTTAAGAGTTGTAAGGAAATATAATCATAATCAATTTTATTACATTGGAAGCCAATCAGAGAGTCATTTACAGAACATATTTTTCTCTTATGGAATGGCTTATGGTGGTGGTGGTTTTGCAATTAGTTACCCTTTGGCAAAAGCACTTCATAAAATGCAAGATCGTTGTATTCAAAGGTACCCTGGATTGTATGGTTCTGATGATAGAATGCATGCTTGTATGGCTGAACTCGGTGTTCCACTCACTAAAGAAATCGGTTTTCACCAGTATGATGTGTATGGGAACCTGTTTGGTCTTCTGGCGGCTCATCCTGTGACTCCATTGGTCTCATTGCACCACCTTGACGTAGTTGAGCCGATCTTCCCCAATATGACTCGGATAGAAGCCCTTCAACAGCTTACCATACCAATGAAGCTTGACTCAGCAGGGCTCATGCAGCAATCCATATGCTACGACAAATCAAAGAGCTGGACCATTTCCGTTTCATGGGGTTTTGCTGTTCAGATATTCCGTGGTGTGTTTTCGCCCCGGGAGATGGAAATGCCTTCGCGAACTTTCTTGAATTGGTATAAAAGAGCAGATTACACTGCATATGCATTCAACACGCGCCCGGTTAGCCGAAACCCTTGCCAGAAGCCTTTTGTATTTTACTTTACAAAGGCAAAATTCAATTCTACAGTGAAAGAGATTGTGAGTGAATATGACAGGCATCGTGTTCCTCACCCAGAGTGCCGGTGGAAGATGGATGATCCTTCGTCTTTTGATAAAGTGGTGGTATATAAGAAGCCAGATCATAATCTATGGGATAGAGCACCAAGAAGAAATTGTTGCAGAGTGATGAATTCAAACAAGAAAGGAACCATGGTGATAGATGTGGGTATGTGTAAGGAAGGTGAGGTAAGTGAAACATAG 1530 0.4438 MKVSLKDSEKLIWEQMRTPTSGSTTHCKTLPKLLLLLILFVSLTYVVYTLKLVSASRACNNDSPFLTNTLINSNINATATSTSTVLRRESRETLQTELRHVVFGIAASAKLWEQRKNYIKLWYKPKTMRGVVWLDENVNTTSNNTESLPPVRISGDTSRFSYTNRQGHRSAIRISRIVSETLELGLKDVRWFVMGDDDTIFVTENLLRVVRKYNHNQFYYIGSQSESHLQNIFFSYGMAYGGGGFAISYPLAKALHKMQDRCIQRYPGLYGSDDRMHACMAELGVPLTKEIGFHQYDVYGNLFGLLAAHPVTPLVSLHHLDVVEPIFPNMTRIEALQQLTIPMKLDSAGLMQQSICYDKSKSWTISVSWGFAVQIFRGVFSPREMEMPSRTFLNWYKRADYTAYAFNTRPVSRNPCQKPFVFYFTKAKFNSTVKEIVSEYDRHRVPHPECRWKMDDPSSFDKVVVYKKPDHNLWDRAPRRNCCRVMNSNKKGTMVIDVGMCKEGEVSET 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g1198 509 PANTHER FRINGE-RELATED 13 508 - -
Lal16g1198 509 Gene3D - 89 345 - -
Lal16g1198 509 Pfam Protein of unknown function, DUF604 230 483 IPR006740 -
Lal16g1198 509 PANTHER TRANSFERRING GLYCOSYL GROUP TRANSFERASE 13 508 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal16g1198 Lal-Chr16 8252911 8257363 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal16g1198 1 508 Glycosyltransferase AT4G23490 67.557 0.0 737
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal16g1198 - - gmx:100818244 831.632
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal16g1198 16 8252911 8257363 Lal16g1198 16 8252911 8257363 ECH
Lal23g1535 23 15493807 15497349 Lal16g1198 16 8252911 8257363 PCT