Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal23g1520 ATGTTTCGTTCTTCTAGATGGAGAAGCGACAAGAAAATCATCAAAGCTCTTTTCAAACTCCATTTCCACGCCACCCACGTGTTTCAATCATCAGGGGTGGATGCATTGGTGTTATCTATAGTTCCAAGCCACATTGGAAAGCCAACTATGAGATTAGACAAAACTAGAGTTCAAGATGGATTTTGTAAATGGGACAATCCGGTATATGAAACTGTCAAATTTGTTCAGGACCCTAAGACTGGGAAAATCAGTGACAGAATTTATCATTTTTTGGTTTCAACGGGGTTATCTAAAGCTAGCTCCATTGGTGAGGTTTCTATAAATTTTGCTGATTATCTTGATGCCACTATACCCTCTTTTCTCTCTCTTCCCTTGAAGGATTCTCAATGTCATGCTGTTTTGCATATATCAATTCAGAGGCTACAACAAAATAGTGGACAAAGAGAGGAAGATGAATGTGAAGATGCAAAAATAAAATCCCAAGATAGGAGCATAGTGAACCATTTAAGCAGTGGTGATATAGATGAGAGCACCAGAAGTTATTCTTCTGAAGATGTCTCTGTCAAAGCAATGATCAATAGACCTGAATTGAGTTCAAATTCTAGGACATCTAGTGGTGGGTCTGACATTACGTTATCCAGTTCTGATTATAGTTCGGGACTTGATACTCCCTGCGACCTTGGACTAAGAAAAATGAACATCCACCCCAAGACAAATGGTTTTCTTTCAGGTACTAGTCATACTTCAGAACCTCAAAAACCTGCTGTCAATTCCCCAACAACAGTGCATGATGTACAGCATAGATCACACTGGGACTGGTCTTCTGGTTCAGAACGTCGGTTGAGTGTAGACGATTCAACAAATGGTTCTCATGATGTTCTTCTACAGGAAAGGTCCCAACAGGCATCCCCTATGGAGATTGAAAGACTCAGGGCTGAACTTGCTGATTTGGCAAGGCAGGTGAATGTGTCAGACATGGAACTACAGACCCTTAGGAAGCAAATTGTAAAGGAAAGCAAGAGAGGGCAGGATCTCACAAAGGAAATAATTATATTGAAAGAGGAAAATGATGCACTCAAGACTGAATGTGACAATCTCAGGTCGTTTCACAAACGTATGGATGAGGCCAAATTGAGGAACAGGTCACATTTGGAAGGTGGAGATCTTCATGCTTTTGTTGAAGAAATCAGGCAAGAATTGAATTATGAGAAGGAACTGAATGCAAATCTCCGATTGCAGTTAAATAAAATGCAAGAATCGAATGCTGAACTGGTTCTTGCTGTACAGGACCTTGATGAAATGTTGGAGCAAAAAAATAGGGAAATGTGTAACCTTTCTAATAACTCCGAACAGGTTAAAAATTCCAAACAGTTTGGGATAAACCTCTCTAAATGTGAATCAGATGATGATGAAGAACAGAAAGCATTGGACAAGCTTGTTAAGGAGCATACCAATGGCAAGGATACAAACTTACTTGAGAAAAAAATAATAGACCTCTATGGTGAAATAGAAATATATAGAAGAGACAAAGATGAGTTGGAGATGCAGATGGAACAACTTGCACTAGACTACGAGATATTGAAACAAGAAAACCACAGCCTTGCATATAAAGTGGAGCAAAGCCAACTGCAGGAGCAGTTAAAAATGCAGTATGAATGTTCATCTCCTCCACCTGAAATAAATGACACTGAAACACGTATCAAGAATCTGGAAGATCAACTAAAGGAACAGTCAGAAGACTTCTCAAATTCTCTGGCTACCATTAAGGCACTTGAAACCCATATCAGAAAATTAGAGGAGGAACTGGATAAGCAATCAGAAGGATTCAAAGCTGATCTAGAAGCAGTAACACGTTGCAAAGTTGAGCAGGAGCAAAGAGCCATCCAGGCTGAGGAAGCATTGCGAAAGACCCGGCTTAAAAATGCTAATACTGCTGAGAGGCTTCAAGAGGAATTCAGAAGGCTCTCAATGCAAATGACCTCTACTTTCGATGCAAATGAGAAGGCTGCCATGAAAGCATTGACAGAAGCGAGTGAACTACGTGCACAAAAAAGTATACTGGAGGGAATGCTGCATAAAGTCAAGGAAGAGAATCAATCACTTAAAACTGAATATGAGGTAAAACTAAAAGACCTTTCCAACCAAATAGACACAATGGCAGTTCATAAACAACAGATGTTTTTGGAAATTGAGGACAAGTCCAAGCGGCTCGAAATTCAGAAGAAGAATTGGGAACAAGTTTGTAGGGATTTCTCTGACGAGATCGAGATGCTAAAAGCTGAGAACGAAAAGCTTAAAGTGGAGATTTCTCGCTTATCTGAGCAAGTAGAAGGAAGTGAAATTTTTAGATCTGACTTGGAACTTGCAAAGAAATTGGTTGAGGAATCTGAGGCACTGTTGCGGAGAAGAACTGTGGAAAGAAACGAACTGGTGAGTGAAATTGCATCATTGAAGAACGAAGCAGAGCAGTCACTTGATGAGTTAAATAGGATGAGACATCGTAAGGATGAAAATGAGAGAGAGGCTGGATTATTGCAGTCAGAGTTAGAATCGGTTAGAGTTCAATACAGCGATTTGAAACATTCCCTTGATGAGGATGAAGCTGAGAAAGAAAAATTAAGAAAGCAGGTTTTCCAGCTAAAAGCTGAACTAAAGAAGAAGGATGATGGAGCTAAAACCAGTCCAAAGAACAAAAAAACTGCTTCAGTCCCTCAGAATTCAAAAGAAATGGCAAGCCTGAGGGAGAAAATAAGAATGCTCGAGGGCCTCATAAAGTCAAAGGAAAGTGCCATGGAAACTTCAACAACAACCTTTTTGGAGAATGAAAAGGAACTCCAGACCAAAATTAAGGAGCTGGAGAGCAAAGTGGAGGAGTTCAATCGGAGTATTGCTTTGCCGAAGATTGTTCAGGACAGAAGTACTAATACTTCTAATGACATATGTGGAGAAGTAAGTACAATTCAGGCTCACAGCTATACTGGATGTGCATCCAAAGAAAACATGGCTGCATTTTTATTCAAGAGTAATGGAAACTTGCCAGAAAAAGAATCAGCAACCTTAGAGATTGATAATGCAGAAAGCAATGTTAATGGCATATTAACCGAGTTGTCATCATTGAAGGAAAGAAACAAATCAATGGAAAACGAACTAAAAGAGATGCAAGATAGATACTCAGAAATGAGCCTCAAATTTGCTGAAGTAGAAGGTGAAAGACAACAACTTGTCATGACTGTAAGGAACCTTAAGAGTATCCACAAAGGCTAA 3264 0.3958 MFRSSRWRSDKKIIKALFKLHFHATHVFQSSGVDALVLSIVPSHIGKPTMRLDKTRVQDGFCKWDNPVYETVKFVQDPKTGKISDRIYHFLVSTGLSKASSIGEVSINFADYLDATIPSFLSLPLKDSQCHAVLHISIQRLQQNSGQREEDECEDAKIKSQDRSIVNHLSSGDIDESTRSYSSEDVSVKAMINRPELSSNSRTSSGGSDITLSSSDYSSGLDTPCDLGLRKMNIHPKTNGFLSGTSHTSEPQKPAVNSPTTVHDVQHRSHWDWSSGSERRLSVDDSTNGSHDVLLQERSQQASPMEIERLRAELADLARQVNVSDMELQTLRKQIVKESKRGQDLTKEIIILKEENDALKTECDNLRSFHKRMDEAKLRNRSHLEGGDLHAFVEEIRQELNYEKELNANLRLQLNKMQESNAELVLAVQDLDEMLEQKNREMCNLSNNSEQVKNSKQFGINLSKCESDDDEEQKALDKLVKEHTNGKDTNLLEKKIIDLYGEIEIYRRDKDELEMQMEQLALDYEILKQENHSLAYKVEQSQLQEQLKMQYECSSPPPEINDTETRIKNLEDQLKEQSEDFSNSLATIKALETHIRKLEEELDKQSEGFKADLEAVTRCKVEQEQRAIQAEEALRKTRLKNANTAERLQEEFRRLSMQMTSTFDANEKAAMKALTEASELRAQKSILEGMLHKVKEENQSLKTEYEVKLKDLSNQIDTMAVHKQQMFLEIEDKSKRLEIQKKNWEQVCRDFSDEIEMLKAENEKLKVEISRLSEQVEGSEIFRSDLELAKKLVEESEALLRRRTVERNELVSEIASLKNEAEQSLDELNRMRHRKDENEREAGLLQSELESVRVQYSDLKHSLDEDEAEKEKLRKQVFQLKAELKKKDDGAKTSPKNKKTASVPQNSKEMASLREKIRMLEGLIKSKESAMETSTTTFLENEKELQTKIKELESKVEEFNRSIALPKIVQDRSTNTSNDICGEVSTIQAHSYTGCASKENMAAFLFKSNGNLPEKESATLEIDNAESNVNGILTELSSLKERNKSMENELKEMQDRYSEMSLKFAEVEGERQQLVMTVRNLKSIHKG 1087
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal23g1520 1087 Coils Coil 620 640 - -
Lal23g1520 1087 Coils Coil 942 962 - -
Lal23g1520 1087 Coils Coil 910 930 - -
Lal23g1520 1087 Pfam N-terminal C2 in EEIG1 and EHBP1 proteins 11 145 IPR019448 -
Lal23g1520 1087 MobiDBLite consensus disorder prediction 238 289 - -
Lal23g1520 1087 PANTHER MYOSIN HEAVY CHAIN-RELATED PROTEIN 6 1087 - -
Lal23g1520 1087 ProSiteProfiles C2 NT-type domain profile. 6 142 IPR019448 -
Lal23g1520 1087 PANTHER MYOSIN HEAVY CHAIN-LIKE PROTEIN 6 1087 - -
Lal23g1520 1087 MobiDBLite consensus disorder prediction 238 264 - -
Lal23g1520 1087 MobiDBLite consensus disorder prediction 156 217 - -
Lal23g1520 1087 Coils Coil 677 715 - -
Lal23g1520 1087 Coils Coil 734 775 - -
Lal23g1520 1087 Coils Coil 307 362 - -
Lal23g1520 1087 Coils Coil 1015 1070 - -
Lal23g1520 1087 Coils Coil 496 530 - -
Lal23g1520 1087 MobiDBLite consensus disorder prediction 884 909 - -
Lal23g1520 1087 MobiDBLite consensus disorder prediction 163 217 - -
Lal23g1520 1087 Coils Coil 800 883 - -
Lal23g1520 1087 Coils Coil 393 441 - -
Lal23g1520 1087 Coils Coil 560 608 - -
Lal23g1520 1087 MobiDBLite consensus disorder prediction 265 279 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal23g1520 Lal-Chr23 15370003 15375275 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal23g1520 - - gmx:100792602 1438.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal23g1520 23 15370003 15375275 Lal23g1520 23 15370003 15375275 ECH
Lal23g1520 23 15370003 15375275 Lal16g1225 16 8537292 8542331 PCT
Lal23g1520 23 15370003 15375275 Lal15g1380 15 15969672 15974883 PCT