Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g1225 ATGTTCCGACCATGGAGAACTGATAAAAACAAAGTCAAAGCAGTTTTCAAACTCCACTTCCATGTCACTCAGATGGTGCAGCCTGGGGTGGAAGCTTTGGTTTTGTCTATAATTCCAGGGGACACTGGAAAACCAAGTACGAGGTTAGAGAAAACTAAGGTCAATGATGGAGTTTGTAGATGGGAGAATCCTGTATATGAAACTGTGAAGTTTTTTCAGGATCCTAAAACTGAGAAATTCAATGAGAGAATATACCATTTTCTGGTTTCAACGGGATTATCAAAAGCTAGCAACATTGGAAATGTTTCTATAGACATTGCCAAATATGTAGAAGCTACAAAGCCCTCTCCAGTTTCTCTTCCCATCAAGAGTTCTCTTTGTGATGCTGTTTTACATGTATCAATACAGAGAATACAAAGAAATGATGATAAGAGAGAGGAAGAGGAATGTGAAGATGCCAAGCTAAAACACAATGACAGGAGCTTGAGGACTTATTTAAGCAATGGAGATATAGATGAAAGCACAAAAAGTGATTCTTCTGAAGATATATCTGGCAAATCAAACACAAACAGAGCTGAATTGAGTGTTGATTGTCGGACATCAAGTGGATCTGACATAACTCTGTCGAGTTCTGATGTCAGCTCCGGGCTTGATACTCCCCGAGAGCTTGAACAAAGAAACACTAGCATCCGTCCCGGCGCAAATGGTTTTCTGTCTGATGTGAGCCAAACTTCAGAGCCTCAAAAACCTGCCGTAGAGGCCTCAGCTGACATGTATGATGTACAAAATAAGTCACATTGGGACTGGTTAGCTGGACCGGAACATGGTTCGAGTGCGGATGATTCAACAAATGGTTCTCAGGTTGCCCTTCCAAAGGAAAGGTCCCAAGAGACATCTGATATCGAAATCAAAAGACTCAAAGTTGAACTTGCTGCGTTGGCGAGGCAGGTGGACATGTCAGACTTGGAACTGCAGACTCTCAGGAAGCAAATTGTAAAGGAAAGCAAAAGAGGACAAGATCTCTCAAAGGAAATCATTGGCTTGAAAGAGGAAAGAGACGCACTCAAGACAGAATGTGATAATCTAAGGTCTTTCAAAAAACGCAACAATGAGGCCAAAGTGAGTAACAGGCTACAGTTGGAAAGTGGGGATCTTCGTACTCTTGTTGAAGAAATTAGAGAAGAGTTGAATTATGAGAAGGACCTGAATGCAAATCTTCGATTACAGTTAAAGAAGACACAAGAATCAAACACCGAGCTAGTTCTTGCAGTGCAGGACCTGGATGATATGTTAGAGCAGAAAAATAAGGACATATTAAATCTTTCAAATAAACATGAGCAGAGTAAAAATTCACACGAGTTAGAGGGAAACTTCTCTAAATGTGAAACAGATGATGACGAAGATCAGAAAGAATTGGACGAGCTTGTTAAGGTGCACAGCAACGCAAAGGAAACAGATTTGCTTGAGCAAAAAATCATAGATCTCTATGGTGAAATCGAGATGTATAGGAGAGACAAAGATGAGTTAGAGATGCAGGTGGAGCAGATCGCGCTAGACTATGAGATATTGAAACAGGAAAAACATGACATTGCATATAAGCTGGAACAAAGCCAACTACAAGAACAGTTAAAAATGCAGTATGAGTGCTCATCTCCTCCTCCTGATATAGATGAATTTGAAAACCATATTGAGGGTCTGGAAAATCAACTCAAGAAACAGTCAGAAGAATTCTCAAATTCTCTGGCTACCATAAAGGCACTCGAAACTAAAATCAGGAGATTAGAGGAGGATCTGGAGAAACAAGCCCAAGGATTCGAAGCTGATCTCGATGCCGTTACACGTGACAGAATCGAGCAGGAGCAAAGAGCCATCCAAGCTGAGAAACAGTCAGAAGAATTGTCAAATTCTCTGGCTACCATAAAGGCACTCGAAACTCAAATCAGGAGATTAGAGGAAGAACTGGAGAAACAAGCCAACGGATTTGAAGCTGATCTAGATGCTGTGACACGTAACAAGGTAGAGCACGAGCAAAGAGCCATTCGAGCTGAGGAAGCTTTGCGAAAGACCAGGCAAAAGAATGCAGACACTGCTGAGAGGCTTCAAGAAGAATTCAGAAGACTCTCGAAGCAAATGGCATCTACATTTGATGCAAATGAGAAGGCTACCATGAGAGCAATGACAGAAGCACGTGGACTTCGTTTGCAGAAAAGGCTGCTGGAGGAAATGCTGCATAAGGTCAAAGAAGAGCTCCAGTCAGACAAAGCTGGATATGAGTTAAAACTGAATGAACTTTCCAACCAAATAGATATGATGACAATTCAGATGCAACAGTTGTTGTCGGATATTGAGGACAAGTCCAAGAAGCTTGAAAATCAGAAGAAGCATGAAGAACAAGTTAGTAGGGAAATCTCTGAGGAGATCCAGATGATAAAAGCTGAGAATGAAAGGCTTAAATCAGAGATTTCATGGTTCTCCGAGCAATTAAAACAAAAGGAAACTTTAACAACTGACTTGGAACTTATGAAGAAGTCAGTTGAGGAATCTGAGATTCTGTTGCAGAGAGGAACAGCGGAGAGAAATGAGCTGGTGAGTACAATTTCTTCGTTGAAGAAGGAAGCAGAAGAGTTACTTGATGAGCTAAATAGGATGCGGCATCTCAAGAATGAAAAGGAGACAGTGGTTAGTCTTTTGGAGACAGAGTTAGAAGAACTTAAAGCTCAACATGTTGACTTGAAAATTTCTCTTTTCGAGGATGAGGCCGAAAAGGAAAAGATAATGAAACAAGTTCTCCAGCTAAAGGATGAACTGAAGCAGAAGGATGATGCATTAAACAACATTGAGAAGAGGCTCAAGGATAGTAGTGGTTGCACACAACTTTCTGATGGATGTAAAACTATTACAAAGAACGAAAAAACTGTTTCAATCCCTCGGAATTCAAAAGAAACGACTTTGATGGATAAATTTGAAGTGTTTGAGGGCCAGATAAAGTCAAAGGAAACAGCCTTGGAAATGTCGAGTTCTTCATTTTTGGAGAAGGAAAGGGAACTCCAGTACAAAACTGAGGAACTTGAGAGCAAAGTAGAAGCGTTCGATCATAGCATTGCTTTGCCGAAGGTTGTTGGGGTTAAGAATATGTCCGTAATGGATAATGAGGATGGCGTATTTACCGAGTTATCATCATTGAAGGAAAGAAACAAATCAATGGAAAGTGAACTGAAAGAGATGCAAGAAAGATACTCGGAAATGAGTCTCAAGTTCGCCGAGGTAGAAGGTGAAAGACAAAAGCTTGTTATGACCGTAAGGACCCTCAAGAACGCCCGGAAGGTTAAAAACTAA 3336 0.4083 MFRPWRTDKNKVKAVFKLHFHVTQMVQPGVEALVLSIIPGDTGKPSTRLEKTKVNDGVCRWENPVYETVKFFQDPKTEKFNERIYHFLVSTGLSKASNIGNVSIDIAKYVEATKPSPVSLPIKSSLCDAVLHVSIQRIQRNDDKREEEECEDAKLKHNDRSLRTYLSNGDIDESTKSDSSEDISGKSNTNRAELSVDCRTSSGSDITLSSSDVSSGLDTPRELEQRNTSIRPGANGFLSDVSQTSEPQKPAVEASADMYDVQNKSHWDWLAGPEHGSSADDSTNGSQVALPKERSQETSDIEIKRLKVELAALARQVDMSDLELQTLRKQIVKESKRGQDLSKEIIGLKEERDALKTECDNLRSFKKRNNEAKVSNRLQLESGDLRTLVEEIREELNYEKDLNANLRLQLKKTQESNTELVLAVQDLDDMLEQKNKDILNLSNKHEQSKNSHELEGNFSKCETDDDEDQKELDELVKVHSNAKETDLLEQKIIDLYGEIEMYRRDKDELEMQVEQIALDYEILKQEKHDIAYKLEQSQLQEQLKMQYECSSPPPDIDEFENHIEGLENQLKKQSEEFSNSLATIKALETKIRRLEEDLEKQAQGFEADLDAVTRDRIEQEQRAIQAEKQSEELSNSLATIKALETQIRRLEEELEKQANGFEADLDAVTRNKVEHEQRAIRAEEALRKTRQKNADTAERLQEEFRRLSKQMASTFDANEKATMRAMTEARGLRLQKRLLEEMLHKVKEELQSDKAGYELKLNELSNQIDMMTIQMQQLLSDIEDKSKKLENQKKHEEQVSREISEEIQMIKAENERLKSEISWFSEQLKQKETLTTDLELMKKSVEESEILLQRGTAERNELVSTISSLKKEAEELLDELNRMRHLKNEKETVVSLLETELEELKAQHVDLKISLFEDEAEKEKIMKQVLQLKDELKQKDDALNNIEKRLKDSSGCTQLSDGCKTITKNEKTVSIPRNSKETTLMDKFEVFEGQIKSKETALEMSSSSFLEKERELQYKTEELESKVEAFDHSIALPKVVGVKNMSVMDNEDGVFTELSSLKERNKSMESELKEMQERYSEMSLKFAEVEGERQKLVMTVRTLKNARKVKN 1111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g1225 1111 MobiDBLite consensus disorder prediction 165 253 - -
Lal16g1225 1111 ProSiteProfiles C2 NT-type domain profile. 4 139 IPR019448 -
Lal16g1225 1111 Coils Coil 859 914 - -
Lal16g1225 1111 Coils Coil 922 949 - -
Lal16g1225 1111 PANTHER MYOSIN HEAVY CHAIN-RELATED PROTEIN 1 627 - -
Lal16g1225 1111 PANTHER MYOSIN HEAVY CHAIN-RELATED PROTEIN 625 1109 - -
Lal16g1225 1111 Coils Coil 338 358 - -
Lal16g1225 1111 MobiDBLite consensus disorder prediction 443 465 - -
Lal16g1225 1111 Coils Coil 492 526 - -
Lal16g1225 1111 MobiDBLite consensus disorder prediction 268 297 - -
Lal16g1225 1111 Coils Coil 389 409 - -
Lal16g1225 1111 MobiDBLite consensus disorder prediction 277 294 - -
Lal16g1225 1111 MobiDBLite consensus disorder prediction 181 250 - -
Lal16g1225 1111 MobiDBLite consensus disorder prediction 443 466 - -
Lal16g1225 1111 Pfam N-terminal C2 in EEIG1 and EHBP1 proteins 9 143 IPR019448 -
Lal16g1225 1111 Coils Coil 424 451 - -
Lal16g1225 1111 Coils Coil 729 820 - -
Lal16g1225 1111 Coils Coil 556 717 - -
Lal16g1225 1111 Coils Coil 1058 1092 - -
Lal16g1225 1111 Coils Coil 303 330 - -
Lal16g1225 1111 PANTHER MYOSIN HEAVY CHAIN-LIKE PROTEIN 625 1109 - -
Lal16g1225 1111 PANTHER MYOSIN HEAVY CHAIN-LIKE PROTEIN 1 627 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal16g1225 Lal-Chr16 8537292 8542331 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal16g1225 - - lang:109340895 1890.16
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal16g1225 16 8537292 8542331 Lal16g1225 16 8537292 8542331 ECH
Lal16g1225 16 8537292 8542331 Lal15g1380 15 15969672 15974883 LSH
Lal23g1520 23 15370003 15375275 Lal16g1225 16 8537292 8542331 PCT