Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal23g1519 ATGAAAATGGGAAAAGCCCAACTTGAAAAGTCTGAAGCAACCAGTAGATACACCAGCAGTAACACAAAATGCAATTCTGTGCAGACGGTAGAGAAAGCAAATGAACATCTTGGATGGTTACCTGATGGCTGGAATGTGGATTTCAGAACTCGAAAAGGTGGTCCAAGGATGGGATGCGGGTATAAGTGTTACATTGATCCAAATGGAAACAAATTTTACTCCAAACCAGAGGTGTTACGATATCTTGAAACTATAAATGGCAGCAGCTGCACTTCCAAGATGGAAGAGAGATGCAATTCCATGCATTCTCCAAACAAGGATGATGTTGAGAAGTCCGCAGTGGAAGATTTATCATCTGGGTGTCTAACAGAAGTGAAGAATAGGAAGAGCAGCAATCACATTGGGAAAGATATGGGTGCATTTGAGAAGTCCACAGTGAAGGATATACCACCTGGGTGGATAACAGAAGTCACGATTAGGAAGGTCGGCAAGGGCAATAAGAAAGATGTGTTATATACAGATCCAGTGAGTGGGTATGGATTCCATTCCAAGAAGGATGTGCTGCGCTACCTTGAGTCTGGAGATATAAGTACGTGCAAAATTAAACCAAGTAAAAGACAAATAGAAGATGAAGACAGATTGACTCCATCATCTGCAGGCAAAAAACAGAAACTCGAGCAGTCTTCAATCAAAGTACAACTTTTTGTAGGCAAAGATATATCTGATGAAGGCATCTTAGAATTGCCAGATGCTAACAGTTCACAAAAAGGCCAAGATGTGAAGGTGGATTCTGGAATGATGGTTGCTCCTGTTCCTACAAGTAGATCAGTTGTCAATACTCAATCACTTCAAAATTCAGGTTCATACCCTCCTGAAATAAATAAAACATCTGATCCAGATGATATGCAAGAGAAGAATCATGTTGTACACATGAAAGAGATTGCTAGTAAAAAAAACCAGAGTAACTGTAATGTATCCAAATCCAAGGAGTTCAATGTGGGTCAGCGGTTTTCACCTAGACTTGCTGGGGTAGAATCTGACCAGTTGGCCAACAGCTTGACCAATGAACTGACTCTTCAAGTACCAAAAAGAAACTTAAGAAAAAGTAGAGTTGCCTTAAATACTGATCTGGCAAATGAATCATCTCAGCAGCTCAATGGTGTCCCAAAATTTGACCATTCGCATGAAATGCAAGAAGAGGTAGTACTAAATAAAGGCAGCATGCTTTCTGGATGCCATGCACTTTTCAAAGTGCAACAATGTCTGCTAGAAACAGATAAAATCAAATACAGTGAACCAGAACAAAATCATTATTCTCTATCCAGGAATTCCAGTTTGCCAAGCCTTAAGGTTGCAGTGAAGACCATCAGAACTGAGTTACCATCTCCAGACAGTCCTCCTAGTAGTCATGGTTTGGACCCTGAAGCTAGTCTTTCAAAAGAAAACAGATTGTATGCGAGTCAGACTAGAAAAAGTGGTTTGCAAGAAATTCAGTCTAACTCAAACAAATCCAGCAACAAGAAAGAACATCAAATTCCTCGCCGGGCTTCAAAACGACTAGCTGGATCTGAACCTGAACTGATGAGTGACTCCTTCTCCCACAACAAGTCTCTTGAATATAAAAGCAAAAGGCCTAAAGGTGAGGTCAATGCTGACTTGCAGCAAAGTGAGGGTCAGCCAACTATGGTACTTGCCGATCATTCATCAATATATGGAAAGCCATCAAATAATAGTGGAAAAACTTCTAAAGTTCCACCCTTAATCAATGATCAACTGGGGAAACTTGAAGATGAAGAAATTGATGATGAGAAATCAGAACTTCAGCAATCCTTTACATTCCATTATTCTTGCTATGACCCTTGTGTGGAATTTGCAATTAAGACCCTCACCAGTTTATTGCCAGTTGAAGATTTAGTTGGCAATTTTTGTACACAAATTCCTGAAACTGATATACAACAACAACCAAGCCTTTGCCAAATTCCTGAAACTGACATGCTACCCAAAAATAAGTTGTTTAAGAATGGTAGAGGAAGCAGTAGTGACAAAAAACTCAGCGCATTACCAGTTGAGGATTCAATTAGTAACAGACCCACTCAGATTCCTGAAACTGATATGTTACCCAAAAGCAAACTGTTCGAGAATGTTAAAGTAAGCAGCAATGACAGAAGTCCACAGGTAAATTCAAAGAAGTCCAAGAACAAGAAAGAGTTTAATATGCAGAGGCGGTTGGCAAAGCGACTTGCTGGCAATGAACCTGGGATGCTTCCTACTGAAAGAGTTCTTGAATATGATTCAGTTGAGAACGGACCCTCTCAGATTCCAGAAACTGTTATGTTACCCAAAAAGAAGTTGTTTGAGAATGTTACAGGAAGCAGCCGTGACAAAAACCTCATGAGTGCATTACCAGTTGAGGGTTCAGTGGGAAACAGATCCACCCAGATTCCAGAAACTGATGTGTTAGCCAAAAATAAGATGTTTGAGAATGTTACAGGAAGCAGCAATGACAAAAGCCCACATGTAAGTTCAAAAAAATCCAAGAACAGGAAAGAGATTAACATACATAGGCGATTGTCAAAGCGACTTGCTGGCAATGAACCTGAGGTAATTCCTACTGAAAGAGCTCTTGAATATGCCACTAGAAAATCATGCAAAGACAAACCGACTGCAACTGTCATTTTAACTAATGGAGAGTGTGGGCATCTTCATGCTGAGAAAGAATCCAAACTTACTGTTCATGCATCTGACATGTCGGAAACCAAAGTATGTGGTGAATCATCAAACAAGAACGACAAGTCATGTGCCCGTATTGCTCCTAATGAACAATTGCAGAGGCTTGGAGCTGAAAATATTTATGATGGCAAATCAGAGCCACAGTTCCCATTACCATTTGGGGACTCATGGTCAGATTCATGCCTAAAATTTGCAATCGAGACTCTTAGTGGTGCTTTGCCAGATGATGCTGCTGCTGCTGACATTTTGCCTTTTATGATTCCTGATATTAATGAGCCAGCAAATAAGGAATTTCCTGAGAGTGTGGTGCAGAAGATCAAAACTGTCATGATTCCTGATATTAATGACCCACCAAATGAGGAAATTCTGCAGAAGAGTATCTATGAAGAAGCTCATGATAACTCCAACCAACTCCAGATAAAACCTGTTATGATTCTTGATATCAATGACTCACCAAATAAGGAATTTCCTGACAGTGTGCTGCAGAAGAGTATCAATGAAACAGCTGATGATAACTCCAATAAACCCCAGATCAAAACTGTTATGATTCCTGATATTAATGACCCACCAAATAAGGAACTTCCCCAGAATGTGATGCAGAAGAGTATCAATCAAGAAGCTCATGATAATTTCAAAGAACCCCAGACCAAGAAAGAGCTTAACGTGGTTTCCCAGCCGTTAGAACAACCCTTGGACCAGCCTGAGTTGAGGAGTAGCTGTACATCCTGTGGAAATTATCCCAAGTTTGCAACTGGAGAGTCTTCTAGTGATGATGTCAATATAACTAAGAAGTTTGATGGAGGAGTATCACTATGTTGTAAAGCTGAAGCTGGGAGCGTAACAGGAATTGATATAAATACAGTAATACTTGAAGAGCCATTGAAGGACAGTGAACCAGTTTTCCAGGGTGAATTTGTTGCAGGATCACAGCAACCTGAAACTATTAACCATGGTCATTCTGTAGGAGAGTATTGTTTACCATTTATGGACTCTTGGTCAGACCCATGCCTAGAATTTCCATTTAAGATTCTTACTGGTGTGATGCCAGTGGATGATGATATACCAATTCAAAGATGTTTTCAGGAATTTGCTGACCCTCATGACCAGAGAGCTGGTATCTCGTTGTTTCCGGAATTTGGATCTTCCAGCATTACTCAAAGTGATGTCTCATTTCACACTGATATAGGGGACAAGTCCATCCCTGGGAAGCAGTCATCCATAAAAGGACGGCCCAGCAGTCATCAATGA 3978 0.4042 MKMGKAQLEKSEATSRYTSSNTKCNSVQTVEKANEHLGWLPDGWNVDFRTRKGGPRMGCGYKCYIDPNGNKFYSKPEVLRYLETINGSSCTSKMEERCNSMHSPNKDDVEKSAVEDLSSGCLTEVKNRKSSNHIGKDMGAFEKSTVKDIPPGWITEVTIRKVGKGNKKDVLYTDPVSGYGFHSKKDVLRYLESGDISTCKIKPSKRQIEDEDRLTPSSAGKKQKLEQSSIKVQLFVGKDISDEGILELPDANSSQKGQDVKVDSGMMVAPVPTSRSVVNTQSLQNSGSYPPEINKTSDPDDMQEKNHVVHMKEIASKKNQSNCNVSKSKEFNVGQRFSPRLAGVESDQLANSLTNELTLQVPKRNLRKSRVALNTDLANESSQQLNGVPKFDHSHEMQEEVVLNKGSMLSGCHALFKVQQCLLETDKIKYSEPEQNHYSLSRNSSLPSLKVAVKTIRTELPSPDSPPSSHGLDPEASLSKENRLYASQTRKSGLQEIQSNSNKSSNKKEHQIPRRASKRLAGSEPELMSDSFSHNKSLEYKSKRPKGEVNADLQQSEGQPTMVLADHSSIYGKPSNNSGKTSKVPPLINDQLGKLEDEEIDDEKSELQQSFTFHYSCYDPCVEFAIKTLTSLLPVEDLVGNFCTQIPETDIQQQPSLCQIPETDMLPKNKLFKNGRGSSSDKKLSALPVEDSISNRPTQIPETDMLPKSKLFENVKVSSNDRSPQVNSKKSKNKKEFNMQRRLAKRLAGNEPGMLPTERVLEYDSVENGPSQIPETVMLPKKKLFENVTGSSRDKNLMSALPVEGSVGNRSTQIPETDVLAKNKMFENVTGSSNDKSPHVSSKKSKNRKEINIHRRLSKRLAGNEPEVIPTERALEYATRKSCKDKPTATVILTNGECGHLHAEKESKLTVHASDMSETKVCGESSNKNDKSCARIAPNEQLQRLGAENIYDGKSEPQFPLPFGDSWSDSCLKFAIETLSGALPDDAAAADILPFMIPDINEPANKEFPESVVQKIKTVMIPDINDPPNEEILQKSIYEEAHDNSNQLQIKPVMILDINDSPNKEFPDSVLQKSINETADDNSNKPQIKTVMIPDINDPPNKELPQNVMQKSINQEAHDNFKEPQTKKELNVVSQPLEQPLDQPELRSSCTSCGNYPKFATGESSSDDVNITKKFDGGVSLCCKAEAGSVTGIDINTVILEEPLKDSEPVFQGEFVAGSQQPETINHGHSVGEYCLPFMDSWSDPCLEFPFKILTGVMPVDDDIPIQRCFQEFADPHDQRAGISLFPEFGSSSITQSDVSFHTDIGDKSIPGKQSSIKGRPSSHQ 1325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal23g1519 1325 ProSiteProfiles Methyl-CpG-binding domain (MBD) profile. 30 101 IPR001739 GO:0003677
Lal23g1519 1325 MobiDBLite consensus disorder prediction 487 506 - -
Lal23g1519 1325 MobiDBLite consensus disorder prediction 507 521 - -
Lal23g1519 1325 ProSiteProfiles Methyl-CpG-binding domain (MBD) profile. 139 206 IPR001739 GO:0003677
Lal23g1519 1325 MobiDBLite consensus disorder prediction 827 850 - -
Lal23g1519 1325 MobiDBLite consensus disorder prediction 204 219 - -
Lal23g1519 1325 Gene3D - 122 233 - -
Lal23g1519 1325 Gene3D - 3 120 - -
Lal23g1519 1325 SUPERFAMILY DNA-binding domain 35 91 IPR016177 GO:0003677
Lal23g1519 1325 PANTHER OS04G0193200 PROTEIN 141 463 IPR038945 -
Lal23g1519 1325 PANTHER OS04G0193200 PROTEIN 11 137 IPR038945 -
Lal23g1519 1325 PANTHER OS04G0193200 PROTEIN 804 1318 IPR038945 -
Lal23g1519 1325 PANTHER OS04G0193200 PROTEIN 680 777 IPR038945 -
Lal23g1519 1325 PANTHER OS04G0193200 PROTEIN 441 669 IPR038945 -
Lal23g1519 1325 CDD MBD 149 201 - -
Lal23g1519 1325 MobiDBLite consensus disorder prediction 1300 1325 - -
Lal23g1519 1325 PANTHER OS04G0193200 PROTEIN 141 463 - -
Lal23g1519 1325 PANTHER OS04G0193200 PROTEIN 804 1318 - -
Lal23g1519 1325 PANTHER OS04G0193200 PROTEIN 11 137 - -
Lal23g1519 1325 PANTHER OS04G0193200 PROTEIN 441 669 - -
Lal23g1519 1325 PANTHER OS04G0193200 PROTEIN 680 777 - -
Lal23g1519 1325 MobiDBLite consensus disorder prediction 1 21 - -
Lal23g1519 1325 MobiDBLite consensus disorder prediction 487 557 - -
Lal23g1519 1325 MobiDBLite consensus disorder prediction 281 300 - -
Lal23g1519 1325 MobiDBLite consensus disorder prediction 536 550 - -
Lal23g1519 1325 SUPERFAMILY DNA-binding domain 148 205 IPR016177 GO:0003677
Lal23g1519 1325 MobiDBLite consensus disorder prediction 204 225 - -
Lal23g1519 1325 MobiDBLite consensus disorder prediction 715 734 - -
Lal23g1519 1325 Pfam Methyl-CpG binding domain 32 85 IPR001739 GO:0003677
Lal23g1519 1325 Pfam Methyl-CpG binding domain 149 195 IPR001739 GO:0003677
Lal23g1519 1325 MobiDBLite consensus disorder prediction 672 709 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal23g1519 Lal-Chr23 15357547 15365888 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal23g1519 - - lang:109331442 1332.01
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal23g1519 23 15357547 15365888 Lal23g1519 23 15357547 15365888 ECH
Lal23g1519 23 15357547 15365888 Lal15g1377 15 15899285 15909928 PCT