Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal15g1377 ATGAAAATTTCAGATTTCATTGTTCAACTTCAAATAAGTGTAGTGGAAGCTTTCTCTTATAACATACAAGCAGTGCGGAACATGGAAAAAAGTGACATTGACAAATCTGAAGACACCAATGTACCAATCAAAAGTAACATGCAATGCCATTCTAAACAACAGATTGTAGAGAAACCAAATGAACATCCTGAATGGTTGCCTGATGGGTGGGATATGGATATTAGAACCCGAAAAAGTGGTCCACATATGGGATCTCCATATAAGTGTTACACTGATCCATTGAAGAGATACACATTCTACTCCAAACCAGAGGTGTTGCGATATCTTGAAAATATAAAGGATAACAACTACACCATCGAGAAGGGGAAGAAATGCACAAATGCACATTCTCCAAGAAATATTATGGTGAAGGAGAAGGGGAAGAGGAAAGAGAAGGAGAAGGGGAAGGAGAAGGAGGAAGGTAACAGCTGCACTTCCAATAAGGAGAAGGAATGCACTAACACACATACCCCAAACAACGTTGTGGATGAGAAGGAGAAGGAGAAGGAGGACAACAGCTGCACATCCAAGAAGGACAAGAAATGCACTACCACACATCCTCGAAGCAATGTTGTGGTAGAGAAGTCCAATGTGGAGGATTTGCCACCTGGGTGGATAAAAGAAGTAAAGGAGCGGAAGGTCGGCAATGGCATCAAGAAAGATCCGTTCTATACAGATCCAGTCAGTGGATATGTGTTCCGTTCTAAGAAGGATGTACTGCGCTATCTTGAGTCTGGAGATATACGTACATGTGCATTTAGACCAAGTAGAAGACAAATTCAAGATGAAGACGCATCAAATCCATCATCAGCTGCCAAAAGACAGAAACCAAACCAGTCTGCACTGGAGAAACAGCTTTTCGCAGGAAAAGAAATATTTGATAAAAGTAACTTAGAATTGTCAGATGCTAACAGGTCAAGGAAAGGGCAACATGCGAAGGTGCCATCTGGAGTGATGGTTGCATCTGTTCCAACAGGTGAATTTGTTGTGAAGATGCATTCACTTGAGGATGGAGCTGAAAGTCCTCCTGAAATGAGGAAAATGTCTGATCCAGATTATGTGCAAGAGAAGGAACATGTCATTGTGATGGAGAATGCTAATGAAAAGAATCACAATGGTGTATCCAAAAAGGAGTTCAGTGTGCATCACCGGTTTTCACCGCGACTTTCTGGGGCTGGACCTGTCCATTTGGAAAACAACGTAATCAAGGAACATACTCCTCAAGTTCCAAGAAGAAACTTAAGGAAAAGTAGAACCACTCTAGACGCGGATATGGAAAATACATCATCTCTGCATCTCAAAGGTGTCCCAAAATTTGAGCAAGTGCATAAAATACAAGAGGTAATAAACACAAGCCACAATCTCTCTGATGACCAATTAGTTTCCAAAGAGCAACCACATCTTCTAGAAACAGATAAAGCAGAAGACAATAAGCCAGAAACTCGTGCTAGCTCAAACAAATCCAGTAATAAGATAGTGCACAACACTCCTCGCCGGGCTTCAAAAAGACTAGCTGGATTTGAGCTTGACCTGATGAGCAACTCCATATCCTGTGATAAAGCTCCTAAAAATAAAAGCAAAATGTCTAAGGATGAGGTCAATGCAGAAATCCATAAAAGTGAGGTTGGAGCAGCTGCAGGGCTTGCTGATCATGCACCAATAAAAGTAGAGTCAGAAAATAAAATAAAATCTCATAAAATTCAACCTAGTACATACGGTGGACTAGGGATAGTAGAAGATGAAGAAATGGGTGATGCGAAATCAGAACCTCAGTTGTCATTTGCATTCCACTACTCTTGGTCTGACCCAAGCTTGGAATCTGCAATTAACACTCTCATGGGTGTGTTGCCAGATAAGGATTCAGTTGATAATCAACCTACTACCGTTCTTGAAACTGATATTCCAAAAACTCCAATTAACAGTGTTACAGGAAGAAGTGACAGAAACCCAACCTTGGAATTTGCAACTAATACCCTCACAAGTGTGCCACTGGCTGAGGGTTCAGTTGATTATGGACTCACTGTAGCCCCTGGAACTAATACTCCAAAAACTTCATTTGATAACGTTACAGGAAGCAGGAACAGAAAGCCACAGGTACGATCAAATAAATCCAAGAACAAGAAAGAGCTGACAGTGCCCATGCGGGTGTCAAAGCGACTTGCTGGACTTGAACCTGAGGTCCGGCCCTCTGAAAGAGCTGTTGAATATGTGTCTAGAAAATCGTGCAAGGAAGAACCAATTGCAACTGTGACTGCAACTGCAACTGCAACCTTAACTAATGGAGCATCTGACCATCTTGATGCTGGGGAAAAAACCAAGGCTACACCTCATGCATCTGACAGGTTGAAAACAGAAGTACTAGGAGAATCATCAAACAAGAGGGAGAAGTCATTAGATGCCCAAACTGTTCCCAACGAACAATTGCAGAAGGGTGAACTTGAAAAAATGGGTGATGAGAGATCAGAACAATTGAAGAAGGTTGAAGCTGAAGATATTTGTGATGAGAGATCAGAATCACAGTTCCCCTTACTGTTTGGGGACCCTTGGTCAGATCCATGCCTAGAATTTGCTATCAAGACTCTCACAGGTGCTTTGCCAGTTGAAGCTCCCACGGACATTTTGCATGGCAGGACTCCTAATATTTATAACTTCTCAAATAATGGATTGCATGAGAGTGTGGTGACGAGCATCAATTTTAAAGCTCATGATAACTCAAACCAGTCCCAGAACAAGAAAGAGCTTAATATGGTTAGTCAGCCATCAACACTATTCCTAGGGCAACCTGAGTTGAGAACCAGCCCCACGACTTGTGAAAATGCTTCTACATTTACAATTAGAGAGTCTTATAATGGTGAAGGCAACAGAACAAGGAGTTTGGATGGAGAACCTCTGCATAGTGAATCTGGAAACGTTACACAACTTGTCTACCATTCTAGAAACATAAGCACACCAATGCATGAATGGCCACTTAAAGAAAATGAAAAGGTTCTTCAGCATGAAAATATTACAATGGAGCAACCACCACTTGAAACTAAAAACCATGATACTACTGAATCACAGCTTTGTGCCTCATTTATGGATACTTGGTCAGACTCATGCCTAGAATTTGCATTCAAGACTCTTACAGGTGCAATACCAGTAGATGAAAATCTATTTCAATGTGGTTTCCCGGAACCTGCTAACTTTCATGACCGGAGGGATGGTGGCTCAACGTTGCCACATATCGGATCTTCCAGCCTTTCTCAAAGTGATATCTCATTTTACCATGATACAGGGATGGAGTCCAGGCCAGAGCAACAGTCATCAACTAGCTTTTCATTCCCAGTGTTGGAAAAACCTAACCTGCAAGATTGCCCTGGAGTGGATCCTAAAAAACACTATTCTCAGTGGAACAAGAATTTTCATAGGTAA 3450 0.4165 MKISDFIVQLQISVVEAFSYNIQAVRNMEKSDIDKSEDTNVPIKSNMQCHSKQQIVEKPNEHPEWLPDGWDMDIRTRKSGPHMGSPYKCYTDPLKRYTFYSKPEVLRYLENIKDNNYTIEKGKKCTNAHSPRNIMVKEKGKRKEKEKGKEKEEGNSCTSNKEKECTNTHTPNNVVDEKEKEKEDNSCTSKKDKKCTTTHPRSNVVVEKSNVEDLPPGWIKEVKERKVGNGIKKDPFYTDPVSGYVFRSKKDVLRYLESGDIRTCAFRPSRRQIQDEDASNPSSAAKRQKPNQSALEKQLFAGKEIFDKSNLELSDANRSRKGQHAKVPSGVMVASVPTGEFVVKMHSLEDGAESPPEMRKMSDPDYVQEKEHVIVMENANEKNHNGVSKKEFSVHHRFSPRLSGAGPVHLENNVIKEHTPQVPRRNLRKSRTTLDADMENTSSLHLKGVPKFEQVHKIQEVINTSHNLSDDQLVSKEQPHLLETDKAEDNKPETRASSNKSSNKIVHNTPRRASKRLAGFELDLMSNSISCDKAPKNKSKMSKDEVNAEIHKSEVGAAAGLADHAPIKVESENKIKSHKIQPSTYGGLGIVEDEEMGDAKSEPQLSFAFHYSWSDPSLESAINTLMGVLPDKDSVDNQPTTVLETDIPKTPINSVTGRSDRNPTLEFATNTLTSVPLAEGSVDYGLTVAPGTNTPKTSFDNVTGSRNRKPQVRSNKSKNKKELTVPMRVSKRLAGLEPEVRPSERAVEYVSRKSCKEEPIATVTATATATLTNGASDHLDAGEKTKATPHASDRLKTEVLGESSNKREKSLDAQTVPNEQLQKGELEKMGDERSEQLKKVEAEDICDERSESQFPLLFGDPWSDPCLEFAIKTLTGALPVEAPTDILHGRTPNIYNFSNNGLHESVVTSINFKAHDNSNQSQNKKELNMVSQPSTLFLGQPELRTSPTTCENASTFTIRESYNGEGNRTRSLDGEPLHSESGNVTQLVYHSRNISTPMHEWPLKENEKVLQHENITMEQPPLETKNHDTTESQLCASFMDTWSDSCLEFAFKTLTGAIPVDENLFQCGFPEPANFHDRRDGGSTLPHIGSSSLSQSDISFYHDTGMESRPEQQSSTSFSFPVLEKPNLQDCPGVDPKKHYSQWNKNFHR 1149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal15g1377 1149 SUPERFAMILY DNA-binding domain 213 263 IPR016177 GO:0003677
Lal15g1377 1149 SUPERFAMILY DNA-binding domain 61 119 IPR016177 GO:0003677
Lal15g1377 1149 ProSiteProfiles Methyl-CpG-binding domain (MBD) profile. 204 271 IPR001739 GO:0003677
Lal15g1377 1149 Gene3D - 32 164 - -
Lal15g1377 1149 Gene3D - 175 299 - -
Lal15g1377 1149 CDD MBD 214 258 - -
Lal15g1377 1149 ProSiteProfiles Methyl-CpG-binding domain (MBD) profile. 56 124 IPR001739 GO:0003677
Lal15g1377 1149 MobiDBLite consensus disorder prediction 482 506 - -
Lal15g1377 1149 MobiDBLite consensus disorder prediction 689 722 - -
Lal15g1377 1149 MobiDBLite consensus disorder prediction 173 198 - -
Lal15g1377 1149 MobiDBLite consensus disorder prediction 267 293 - -
Lal15g1377 1149 MobiDBLite consensus disorder prediction 779 813 - -
Lal15g1377 1149 MobiDBLite consensus disorder prediction 689 710 - -
Lal15g1377 1149 MobiDBLite consensus disorder prediction 138 159 - -
Lal15g1377 1149 MobiDBLite consensus disorder prediction 774 834 - -
Lal15g1377 1149 PANTHER OS04G0193200 PROTEIN 28 675 - -
Lal15g1377 1149 PANTHER OS04G0193200 PROTEIN 700 1142 - -
Lal15g1377 1149 Pfam Methyl-CpG binding domain 214 260 IPR001739 GO:0003677
Lal15g1377 1149 Pfam Methyl-CpG binding domain 60 117 IPR001739 GO:0003677
Lal15g1377 1149 MobiDBLite consensus disorder prediction 138 199 - -
Lal15g1377 1149 MobiDBLite consensus disorder prediction 275 293 - -
Lal15g1377 1149 PANTHER OS04G0193200 PROTEIN 28 675 IPR038945 -
Lal15g1377 1149 PANTHER OS04G0193200 PROTEIN 700 1142 IPR038945 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal15g1377 Lal-Chr15 15899285 15909928 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal15g1377 - - lang:109332897 1852.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal15g1377 15 15899285 15909928 Lal15g1377 15 15899285 15909928 ECH
Lal23g1519 23 15357547 15365888 Lal15g1377 15 15899285 15909928 PCT