Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal23g1473 ATGGCTCTGTTCTCACATCACACTCAGTCTTCTCCAGTGCTATTGGGTTTCATTCTTTTCATTGTTTTCAAAGGGGTTTCAGGGGCTACATTTACATTCATGAACAAATGCGATTACACAGTGTGGCCAGGAATTTTGGGAAAACCAGACCTTGGAACCACCGGATTCGAGCTCACAAAGGGAAGTTCCAGAAGCTTCCTGGCTCCGACCGGTTGGTCCGGCCGATTCTGGGCACGAACCAATTGCAAATTCGACGATTCCGGCCGTGGCACTTGTGCCACCGCTGACTGCGGCTCCGACGATATAAACTGCAACGGTGCGGGAGCTTCACCGCCGGCAACACTCGCCGAGTTCACCCTCGGCACTGGGTCCATGGACTATTACGATGTCAGCCTGGTCGATGGCTACAATCTTCCGATGATGGTAGCGGCCAGTGGTGGTTCAGGGTCATGTGCCACCACGGGTTGCGGCGTGGACCTGAACCAGCACTGCCCAAGTGAGTTGAGAGTGGAAGGCGGTGATGCTTGTAAGAGTGCTTGTGAGGCATTTGGAAAAGCAGAGTATTGTTGCAATGGAGAATTCAGTAACCCCTCTACGTGTAAACCTTCAGTGTACTCAGAAATGTTCAAATCTGCATGTCCTAAATCTTATAGCTATGCTTATGATGATGCCACTAGCACTTTTACTTGTACTGGAGCTGATTATACAATCACATTTTGTCCTTCTTCCCCAAGTCTAAAGTCTTCAACTGATTCTTCTCCAAAGGGAACAGATTCAGGTTCAGGGTCTGAATCACAATCATCTGCTGAACAATCTGAACTGGCTTCTACTTCGTGGCTAGCTGATATGGCTACAGCTACAGGGGACTCAAGCAGTAGCCACCATTCTGGTTTTTCAAAAGCCTCATTTTTTGTGGTTGTTGTTATTACTTTCATTCTTTACCTTTTGGTATATTGA 957 0.4775 MALFSHHTQSSPVLLGFILFIVFKGVSGATFTFMNKCDYTVWPGILGKPDLGTTGFELTKGSSRSFLAPTGWSGRFWARTNCKFDDSGRGTCATADCGSDDINCNGAGASPPATLAEFTLGTGSMDYYDVSLVDGYNLPMMVAASGGSGSCATTGCGVDLNQHCPSELRVEGGDACKSACEAFGKAEYCCNGEFSNPSTCKPSVYSEMFKSACPKSYSYAYDDATSTFTCTGADYTITFCPSSPSLKSSTDSSPKGTDSGSGSESQSSAEQSELASTSWLADMATATGDSSSSHHSGFSKASFFVVVVITFILYLLVY 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal23g1473 318 PRINTS Pathogenesis-related protein signature 30 42 IPR001938 -
Lal23g1473 318 PRINTS Pathogenesis-related protein signature 54 63 IPR001938 -
Lal23g1473 318 PRINTS Pathogenesis-related protein signature 75 86 IPR001938 -
Lal23g1473 318 PRINTS Pathogenesis-related protein signature 88 117 IPR001938 -
Lal23g1473 318 PRINTS Pathogenesis-related protein signature 126 142 IPR001938 -
Lal23g1473 318 PRINTS Pathogenesis-related protein signature 231 240 IPR001938 -
Lal23g1473 318 MobiDBLite consensus disorder prediction 244 268 - -
Lal23g1473 318 Gene3D Thaumatin 29 241 IPR037176 -
Lal23g1473 318 CDD TLP-PA 30 240 - -
Lal23g1473 318 SMART tha2 31 241 IPR001938 -
Lal23g1473 318 PANTHER PATHOGENESIS-RELATED THAUMATIN SUPERFAMILY PROTEIN 10 261 - -
Lal23g1473 318 SUPERFAMILY Osmotin, thaumatin-like protein 29 242 IPR037176 -
Lal23g1473 318 Pfam Thaumatin family 35 241 IPR001938 -
Lal23g1473 318 PANTHER OS03G0233200 PROTEIN 10 261 IPR001938 -
Lal23g1473 318 ProSiteProfiles Thaumatin family profile. 28 241 IPR001938 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal23g1473 Lal-Chr23 15068698 15070636 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal23g1473 15 265 Receptor kinase-like Gene Family AT5G38280 46.617 1.57e-71 232
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal23g1473 - - lang:109331061 516.538
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal23g1473 23 15068698 15070636 Lal23g1473 23 15068698 15070636 ECH
Lal1g0149 1 961616 963311 Lal23g1473 23 15068698 15070636 ECH
Lal15g0095 15 650078 652123 Lal23g1473 23 15068698 15070636 LSH