Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal23g1453 ATGTTGCAACAGAGAACACGACGTCGTTGCGAGGGTACAGCCATGGGTGCCATCATTCTCGATCTTCGACCTGGCCTTGGAATTGGACCTTTCTCTCTCGGAATGCCAATTAGTGAAGCATTTGCCCAGATAGAGCAGCAGCCTAACATATACGATGTTGTGCATGTGAAGTATTATGATGAGGAGCCCCTGAAGATGGATATTGTTATAAGCTTTCCCGATCATGGCTTTCATCTTCGTTTCGATCCATGGTCTCAGAGACTGCGGCTTATTGAAATATATGATGTAAAGCGGCTTCAAATGCGCTATTCCACTTCCCTGATTGGGGGACCAGCGACTCTAGCCACCTTTGTTGCTGTATATGCATTGTTTGGGCCCACATACCCTGGAGTTTATGATAGGGAGAGAGGTGTTTACACACTATTCTATCCGGGGCTTTCCTTTGCATTTCCTATTCCAAGTCAGTATACAGAATGCTGTCATAATGGGGGAGTGGAATTGCCATTGGAGTTTCCAGATGGCACCACACCAGTTACCTGCCGTGTTTCTATATATGATAGTTCTTCAGGTAAGAAGGTTGGCGTGGGGTCTTTGATGGACAAGGCTTCTGCTCCTCCATTACCTCCTGGCAGCATTTACATGGAAGAGGTTCATGTCAAGCTGGGGGAAGAATTGTACTTCACTGTTGGCACTCAACACATTCCTTTTGGTGCATCTCCACAGGATGTCTGGACCGAGCTAGGTCGCCCCTGTGGCATCCATCAGAAGCAGGTAGATCAAATGGTTATTCATTCTGCCTCAGATCTTCGGCCACGAACAACACTTTGTGGAGATTACTTCTACAATTATTTCACTCGTGGTCTGGATATCTTATTTGATGGGCAGACCCACAAAATCAAGAAGTTTGTGTTGCATACCAACTACCCTGGTCATGCCGATTTCAATTCATACATTAAGTGCAACTTTGTTATCTATTGTTCAGAATCAGTGGGGGGATCTTTTGAGGAAGTACATAACAGCAAGCAGAGGGCTATTACACCTAGCACAAAGTGGGAACAAGTGAAGGAAATCCTTGGGGATTGTGGGCGAGCTGCCATTCAAACGCAAGGTTCTGCAAGTAACCCTTTTGGTTCTACTCTTGTATACGGTTATCAAAATATTGCTTTCGAGGTGATGAAGAATGGTTATATTGCAACTATAACTCTCTTCCAGTCATGA 1218 0.4507 MLQQRTRRRCEGTAMGAIILDLRPGLGIGPFSLGMPISEAFAQIEQQPNIYDVVHVKYYDEEPLKMDIVISFPDHGFHLRFDPWSQRLRLIEIYDVKRLQMRYSTSLIGGPATLATFVAVYALFGPTYPGVYDRERGVYTLFYPGLSFAFPIPSQYTECCHNGGVELPLEFPDGTTPVTCRVSIYDSSSGKKVGVGSLMDKASAPPLPPGSIYMEEVHVKLGEELYFTVGTQHIPFGASPQDVWTELGRPCGIHQKQVDQMVIHSASDLRPRTTLCGDYFYNYFTRGLDILFDGQTHKIKKFVLHTNYPGHADFNSYIKCNFVIYCSESVGGSFEEVHNSKQRAITPSTKWEQVKEILGDCGRAAIQTQGSASNPFGSTLVYGYQNIAFEVMKNGYIATITLFQS 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal23g1453 405 Pfam Phagosome assembly factor 1 28 403 IPR005373 -
Lal23g1453 405 PANTHER UPF0183 PROTEIN C16ORF70 13 404 IPR005373 -
Lal23g1453 405 PANTHER UPF0183 PROTEIN 13 404 IPR039156 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal23g1453 Lal-Chr23 14901491 14906939 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal23g1453 - - aprc:113869507 792.727
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal23g1453 23 14901491 14906939 Lal23g1453 23 14901491 14906939 ECH
Lal15g0109 15 753773 772416 Lal23g1453 23 14901491 14906939 LSH