Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal15g0109 ATGTTGCATCAGAAACCACGACGTCGTTGCGAGGGCACCGCCATGGGCGCCATCATTCTCGATCTCCTACCTGGCCTCGGAATCGGACCCTTCTCTCTCGGGATGCCAATTAGTGAAGCATTTTCTCAAATAGAGAAGCAGCCTAACATATACGATGTCGTGCATGTCAAGTATTACGATGAGAATTCTTCTGTATTTTTGCTTACGCAGGAGCCCTTGAAGATGGATATTGTTATAAGCTTTCCCGATCATGGCTTTCATCTTTGTTTCGATCCATGGTCTCAGAGACTGCGGCTTATTGAAATATATGATGTAAAGCGGCTTCAAATGCGCTATTCCACTTCCCTGATTGGGGGACCAGCAACTTTAGCAACCTTCATTGCTGTATATGCACTGTTTGGGCCCACATATCCTGGAGTTTACGATGGGGAGAGAGGTGTTTACACACTATTCTACCCGGGGCTTTCCTTTGCATTTCCTATTCCAAGTCAGTATACAGAATGCTGTCATAATGGGGGAGTGGAATTGCCATTGGAGTTTCCAGATGGCACCACGCCAGTTACATGCCGTGTTTCTATATACGATAGTTCTTCTGGTAAGAAGGTCGGCGTTGGGTCCTTAATGGATAAGGCTTCTGCTCCTCCATTACCTGTTGGCAGCATTTACATGGAAGAGGTTCATGTTAAGCTGGGGGAAGAATTGTTCTTCACTGTTGGTACTCAACTCATTCCTTTTGGTGCATCTCCACAGGATGTCTGGACTGAGCTAGGCCGTCCCTGTGGAATCCATCAGAAGCAGGTAGATCAAATGGTTATTCATTCTGCATCAGACCTTCGGCCACGAACAACAGTTTGTGGAGATTACTTCTACAATTATTTCACTCGTGGTCTGGATATCTTATTTGATGGGCAGACTCAGAAAATCAAGAAGTTTGTGTTACATACCAACTACCCTGGTCATGCTGATTTCAACTCATACGCTAAGTGCAACTTCGTTATCTATGGCTCAGATTTCAGGGGATCTTTTCAGGAAGTACATAATAGCAAACAGAGGGCTATTACAACTAGCACAAAGTGGGATCAAGTGAAGGAAATCCTTGGGGGTTGTGGGCGAGCTGCCATTCAAAAACAAGGTTCTGGAAGTAACCCTTTTGGTTCTACTCTTGTATATGGTTATCAAAATATTGCTTTTGAGGTGATGAAGAATGGTTATATTGCAACTATAACTCTCTTCCAGTCATGA 1242 0.4428 MLHQKPRRRCEGTAMGAIILDLLPGLGIGPFSLGMPISEAFSQIEKQPNIYDVVHVKYYDENSSVFLLTQEPLKMDIVISFPDHGFHLCFDPWSQRLRLIEIYDVKRLQMRYSTSLIGGPATLATFIAVYALFGPTYPGVYDGERGVYTLFYPGLSFAFPIPSQYTECCHNGGVELPLEFPDGTTPVTCRVSIYDSSSGKKVGVGSLMDKASAPPLPVGSIYMEEVHVKLGEELFFTVGTQLIPFGASPQDVWTELGRPCGIHQKQVDQMVIHSASDLRPRTTVCGDYFYNYFTRGLDILFDGQTQKIKKFVLHTNYPGHADFNSYAKCNFVIYGSDFRGSFQEVHNSKQRAITTSTKWDQVKEILGGCGRAAIQKQGSGSNPFGSTLVYGYQNIAFEVMKNGYIATITLFQS 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal15g0109 413 PANTHER UPF0183 PROTEIN 13 412 IPR039156 -
Lal15g0109 413 Pfam Phagosome assembly factor 1 28 411 IPR005373 -
Lal15g0109 413 PANTHER UPF0183 PROTEIN C16ORF70 13 412 IPR005373 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal15g0109 Lal-Chr15 753773 772416 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal15g0109 - - aprc:113869507 746.117
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal15g0109 15 753773 772416 Lal23g1453 23 14901491 14906939 LSH