Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal23g1447 ATGGTCCAAATGGGGTCTTTCAAGCTCTTCTCTTTCTCTATTATTGCATTCATTGCAACTACTGCAGTGTTACTCGGAGCAGAATCAAAGACACACGGGGGAGACATAGAAGCACTGAAGGATTTAAAGAATGCCCTTGAACCCGGTTCAGTAAACCCAGGTTCGTGTTTGAATTCCTGGGACTTCACTTTCGACCCATGCGACAACCTCTTCAGCGACAAATTCACGTGCGGGTTTAGGTGTGATATTGTTGTGTCCGGGTTTAGCCGAGTCACTGAACTCAGTCTTGACTCAGCGGGTTACACTGGCTCACTTTCCTCCACTTTGAATAACCTTCCATATCTTCAAACTCTTGATGTCTCAAACAACTACTTCTCTGGCAACATACCCGAGTCCCTATCAAACTTAACTCGGCTGAGTCGACTCGGTCTATCAGTTAATTATTTTTCCGGAGAGATACCATCTTCCATTGGAACCCTCTCCAACCTCGAAGAGCTGTACCTTGATAACAACAACCTCGAAGGAACAATGCCCACAAGCTTCAATGGCCTCGTTAGTTTGAAAAGACTCGAACTTCAGCACAACAAGCTTAATGGATACATTCCAGATTTGAGTTCTTTCACTAACCTCTTATACCTTGACCTCAGCGACAACGTCTTAGTCGGAGCATTACCGGCGACGTTGCCGGTTTCCTTAGTTCAGATTTCAATGAGGAACAACAACTTAACCGGAACCTTAACTTCTGAAAGCTTCAAGAACTTGATGTACTTGCAGGTAGTGGATTTAAGTTCAAACCAAATCAGTAGTTCTGTTCCTTCCGTTCTGTTTGAGCTTCCATCGCTTCAGCAACTCACACTTTCCGTCAACCAATTCTCTTCAATTGAAGTTCCTTCTTATGGTTACCAAAGTGGGCTTATAGCGGTTGATCTGAGCAATAACCAGCTTAAAGGGTTTTTGCCATCGTTCATGGCTTTTATGCCAAAGCTTTCATCTTTGTCATTGGAGAACAACGAGTTCAGTGGTTTGATACCGACACAGTTTGCATTGAAGACGGTTTTTCCTGAAAATGGGGTGTCACCGTTCGCTAGGCTTTTGTTGGGGGGCAATTACCTTCTTGGAGGGGTACCCAGACCTCTATTAGGACTTAAACCTGACTCTGCGAATGTGAGCTTAGGTGATAACTGCTTGTATAGGTGTCCTCTTAGATTCTTTTTCTGCCAAGGTGGACAACAAAAATCATGGGAAGAATGTAAGAGATTTAACCCTGTCATCTCATAG 1278 0.439 MVQMGSFKLFSFSIIAFIATTAVLLGAESKTHGGDIEALKDLKNALEPGSVNPGSCLNSWDFTFDPCDNLFSDKFTCGFRCDIVVSGFSRVTELSLDSAGYTGSLSSTLNNLPYLQTLDVSNNYFSGNIPESLSNLTRLSRLGLSVNYFSGEIPSSIGTLSNLEELYLDNNNLEGTMPTSFNGLVSLKRLELQHNKLNGYIPDLSSFTNLLYLDLSDNVLVGALPATLPVSLVQISMRNNNLTGTLTSESFKNLMYLQVVDLSSNQISSSVPSVLFELPSLQQLTLSVNQFSSIEVPSYGYQSGLIAVDLSNNQLKGFLPSFMAFMPKLSSLSLENNEFSGLIPTQFALKTVFPENGVSPFARLLLGGNYLLGGVPRPLLGLKPDSANVSLGDNCLYRCPLRFFFCQGGQQKSWEECKRFNPVIS 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal23g1447 425 Gene3D Ribonuclease Inhibitor 35 202 IPR032675 -
Lal23g1447 425 PANTHER LEUCINE-RICH REPEAT (LRR) FAMILY PROTEIN 7 423 - -
Lal23g1447 425 SMART LRR_typ_2 160 183 IPR003591 -
Lal23g1447 425 SMART LRR_typ_2 278 303 IPR003591 -
Lal23g1447 425 SMART LRR_typ_2 112 136 IPR003591 -
Lal23g1447 425 SMART LRR_typ_2 184 207 IPR003591 -
Lal23g1447 425 SMART LRR_typ_2 326 349 IPR003591 -
Lal23g1447 425 Pfam Leucine rich repeat 161 220 IPR001611 GO:0005515
Lal23g1447 425 Pfam Leucine rich repeat 234 291 IPR001611 GO:0005515
Lal23g1447 425 Pfam Leucine Rich Repeat 115 136 IPR001611 GO:0005515
Lal23g1447 425 SUPERFAMILY L domain-like 73 350 - -
Lal23g1447 425 PANTHER LEUCINE-RICH REPEAT (LRR) FAMILY PROTEIN 7 423 - -
Lal23g1447 425 Gene3D Ribonuclease Inhibitor 203 418 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal23g1447 Lal-Chr23 14855593 14856870 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal23g1447 17 366 Receptor kinase-like Gene Family AT5G01950 32.303 1.14e-36 140
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal23g1447 - - gmx:100811366 586.26
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal23g1447 23 14855593 14856870 Lal23g1447 23 14855593 14856870 ECH
Lal15g0112 15 798599 799864 Lal23g1447 23 14855593 14856870 LSH