Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal15g0112 ATGGGGTCTTTCAAGTTCTTCTCGTTCTCTATTATTGCATTCATTGCAGCTTCTGAAGTGTTATTTGGAGCAGAATCAAAGACATATTGGGGTGACATAGAAGCGCTGAAGGATCTGAAAAATGGCCTTGAACTCAGTTTAATAAACCCAGGTTCATGTTTGAGTTCCTGGGACTTCACTTTCGACCCATGCGACAACCTCTTCAGGGATAAATTCACATGCGGATTTAGGTGTGACATTGTCGCATCCGGTTTGAGCCGAGTCACCGAACTCAGCCTAGACTCAGCGGGTTACACTGGTTTACTTTCGTCAACCTTAAACCTTCCATATCTACAAACCCTTGATGTCTCAAACAACTATTTCTCTGGCCAAATTCCCCAGTCACTATCAAATTTAACTCGGCTGAGTCGACTTGGTCTTTCAATGAACTCTTTTTCTGGTGAGATACCCACTTCAATTGGAACTCTCTCCAACCTCCAAGAGCTATACCTTGATAACAACAATCTCGAAGGAACAATACCCACAAGCTTCAATGGCCTTGTTAGCTTGAAAAGACTCGAACTTCAACACAACAAGCTCAATGGGTACCTTCCAGATTTGAGTTCTCTCACAAACCTCTTCTACCTTGACATCAGCGACAACGCCATCATTGGAACATTTCCGGCGACGCTTCCGGTTTCCTTAGTACAGGTTTCAATGAGGAATAACAACTTAAGTGGAACCTTAACTTTTGAAGGCTTCAAGAACTTGATGTACTTGCAGGTAGTGGATTTAAGTTCAAACCAAATCAGTGGTTCTGTTCCTTTCGTTCTCTTTGAGCTTCCATCTCTTCAGCAACTTACGCTCTCCTCCAATCAATTCTCTTCACTTGAAGTTCCTTATTACGGTTACCAAAGCGGGCTTATAGCGGCTGATCTGAGCAATAACCAGGTTCAAGGGTTTTTGCCAACGTTCATGGCTTTTATGCCAAAGCTTTCATCTTTGTCCTTAGAGAATAACGAGTTCAGTGGGTTGATACCGACCCAGTTCGCATTGAAGACGGTTTTTCCTGAAATTGGAGTGTCTCCATTCTCTAGGCTTCTGTTGGGGGGCAATTACCTTCTTGGAGGGGTACCAAGACCTCTATTAGGACTCAAACCCGAGTCTGCAAATGTTAGCTTAGGTGATAACTGCTTATATAGGTGCCCTCTTAGATATTTTTTCTGCCAAGGTGGTGAACAAAAATCATGGGAAGAATGTAAGAGATTTATCCCTGGCATCCCCTAG 1266 0.4321 MGSFKFFSFSIIAFIAASEVLFGAESKTYWGDIEALKDLKNGLELSLINPGSCLSSWDFTFDPCDNLFRDKFTCGFRCDIVASGLSRVTELSLDSAGYTGLLSSTLNLPYLQTLDVSNNYFSGQIPQSLSNLTRLSRLGLSMNSFSGEIPTSIGTLSNLQELYLDNNNLEGTIPTSFNGLVSLKRLELQHNKLNGYLPDLSSLTNLFYLDISDNAIIGTFPATLPVSLVQVSMRNNNLSGTLTFEGFKNLMYLQVVDLSSNQISGSVPFVLFELPSLQQLTLSSNQFSSLEVPYYGYQSGLIAADLSNNQVQGFLPTFMAFMPKLSSLSLENNEFSGLIPTQFALKTVFPEIGVSPFSRLLLGGNYLLGGVPRPLLGLKPESANVSLGDNCLYRCPLRYFFCQGGEQKSWEECKRFIPGIP 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal15g0112 421 Gene3D Ribonuclease Inhibitor 198 409 IPR032675 -
Lal15g0112 421 ProSiteProfiles Leucine-rich repeat profile. 182 204 IPR001611 GO:0005515
Lal15g0112 421 SUPERFAMILY L domain-like 39 381 - -
Lal15g0112 421 PANTHER LEUCINE-RICH REPEAT (LRR) FAMILY PROTEIN 5 418 - -
Lal15g0112 421 PANTHER LEUCINE-RICH REPEAT (LRR) FAMILY PROTEIN 5 418 - -
Lal15g0112 421 SMART LRR_typ_2 322 345 IPR003591 -
Lal15g0112 421 SMART LRR_typ_2 108 132 IPR003591 -
Lal15g0112 421 SMART LRR_typ_2 274 299 IPR003591 -
Lal15g0112 421 SMART LRR_typ_2 156 179 IPR003591 -
Lal15g0112 421 SMART LRR_typ_2 180 203 IPR003591 -
Lal15g0112 421 Gene3D Ribonuclease Inhibitor 31 197 IPR032675 -
Lal15g0112 421 Pfam Leucine rich repeat 234 287 IPR001611 GO:0005515
Lal15g0112 421 Pfam Leucine rich repeat 157 216 IPR001611 GO:0005515
Lal15g0112 421 Pfam Leucine Rich Repeat 111 132 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal15g0112 Lal-Chr15 798599 799864 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal15g0112 85 373 Receptor kinase-like Gene Family AT1G17750 29.022 5.75e-23 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal15g0112 - - gmx:100811366 582.408
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal15g0112 15 798599 799864 Lal23g1447 23 14855593 14856870 LSH