Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal23g1381 ATGGCACCCTCTTACTGCGTGAAGGAGAGTAAACAGTGTGTGATTTGGGTTGAAAAGTACTTCAAAGATTGCCTCTGCAATTTGAAAGATGAAATATCTTTTGGGTTAGGGTTCTTTAGCCTAATGTGTTGGGGAGCAGCAGAAATTCCTCAAATAATTACCAACTTTCAAACCAAGTCCAGCCATGGAGTCTCCCTTACTTTTATCCTTGCTTGGGTTGCTGGTGATATGTTCAACCTCATGGGTTGCCTTCTGGAGCCAGCTACTCTTTACACAGTCACTACAATCATATTAGCATCGCAAAGCCTCTATTATGAATACATCTATAGTTGGTGTAAGCGTCGTCATAATATCACCAACGAAGAGGCTCAAGAGGATGAAACCAAACCATTAATACTGAAACCAGGCCACGAGTCTGTGATTCCAATACCAAATGTCAGGCATAAATCAACACCTCGACATGAGTTCCACTACATATCAGCGAGATCAATGGCTGGGAGTGGTACCCCACACTTTTGTTCCTACATTAGAGCAGCTAAAAGTGGCCCTTCAGCCATGCCATTGAATAATGATTCTTCTTCTGATGATGATGAGGCACCAACTGTTCCTTTTATAAGGCCAACAACACAACCTAGATCCATACCCAGATCTAATGCTAGAATCTATGGAACATTTCTAGCGGCATCAGCTACCTTGCCTATGCGTGGTAATGCACTAAAAGAGGGATACGTACTATTTCATGGAAGGAATCTCTTGCAGGAGCATGCCATGCACAGTTCTTTGGGTCAATGGTTGGGATGGCTCATGGCTGCTATCTATATGGGTGGTCGTCTACCTCAAATATGGTTAAATGGATTAAATCCTCTCATGTTTGTCTTTGCACTAATTGCTAATTCAACTTACGTGGGAAGTATTCTTGTACGAACTACTGAATGGGAAAGCATCAAAGCTAATTTGCCGTGGTTATTGGATGCTGTAGTTTGCGTAGCACTGGACCTATTCATAATAATGCAGTACGTATACTACAGAAACTTTCGAAGGAGTGCAAGCAATGATGATTATGAAGACTGCAACGAAGCGTCAAAAGCTGATTCATCTTGA 1101 0.4205 MAPSYCVKESKQCVIWVEKYFKDCLCNLKDEISFGLGFFSLMCWGAAEIPQIITNFQTKSSHGVSLTFILAWVAGDMFNLMGCLLEPATLYTVTTIILASQSLYYEYIYSWCKRRHNITNEEAQEDETKPLILKPGHESVIPIPNVRHKSTPRHEFHYISARSMAGSGTPHFCSYIRAAKSGPSAMPLNNDSSSDDDEAPTVPFIRPTTQPRSIPRSNARIYGTFLAASATLPMRGNALKEGYVLFHGRNLLQEHAMHSSLGQWLGWLMAAIYMGGRLPQIWLNGLNPLMFVFALIANSTYVGSILVRTTEWESIKANLPWLLDAVVCVALDLFIIMQYVYYRNFRRSASNDDYEDCNEASKADSS 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal23g1381 366 Gene3D - 35 126 - -
Lal23g1381 366 Gene3D - 261 355 - -
Lal23g1381 366 MobiDBLite consensus disorder prediction 185 214 - -
Lal23g1381 366 PANTHER PQ-LOOP PROTEIN/TRANSMEMBRANE FAMILY PROTEIN 1 360 - -
Lal23g1381 366 SMART ctns 46 77 IPR006603 -
Lal23g1381 366 SMART ctns 275 299 IPR006603 -
Lal23g1381 366 PANTHER SEVEN TRANSMEMBRANE PROTEIN 1-RELATED 1 360 - -
Lal23g1381 366 Pfam PQ loop repeat 32 87 IPR006603 -
Lal23g1381 366 Pfam PQ loop repeat 261 312 IPR006603 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal23g1381 Lal-Chr23 14483773 14486271 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal23g1381 K23678 - gmx:100815310 491.115
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal23g1381 23 14483773 14486271 Lal23g1381 23 14483773 14486271 ECH
Lal23g1381 23 14483773 14486271 Lal16g1518 16 12296565 12308119 PCT
Lal16g1518 16 12296565 12308119 Lal23g1381 23 14483773 14486271 PCT