Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal23g1265 ATGAAGGCAAGGAGAGGAAAACGCTCAGAGGGCTTTTGGCCTTCCCTTGTGATGAAAAAATGGTTAAATGTCAAGCCAAAGGTGAATGATTTTAGTGAAGATGAAGTAGACACTGAAACTGAGAGTGAAGATGATGCTTCCTCTCCTAAATATTCAAGAATGCGTGAGTGTGGAGATAATAATCCACTTAAAACACAAGGAACCCAATCCATATTCTCAAGTCAAACATCAGATGCATCATGTAAGGGTTACAAGATAAGTCACAGAAGAGGAAAATCAGAAACTCTGCGTGCTCAGTACATAAATACAAAGGAAGTGAGAGTAGCAATTGGCACTTGGAATGTTGCTGGAAAAAATCCACATGATGATCTTGAGATTGATGAGTGGATTTGTGCTGAAGACCAAGCAGATATTTACATTCTTGGTTTCCAAGAGGTAGTTCCACTGAGTGCTGGAAATGTACTAGGAGCAGAGGATAATACACCAATTCATAAATGGGAGGCAATCATTCGAAGAATTCTAAACAAATCTTCTGAATCGGAAAGTGATAGTAAACACAAAAGCTATAGTGCCCCTCCTTCTCCAGTTTTAAGAACTTCATCTGCCGCAGATGTTCTGGCAGATAACTTAGATGCTAATGCAATAGATATGATGAATGAGGAGTATGTGGAAACAGTTGACAATGATTTGTTGGAGCAGCCAGAATTGAAAAACATTATTGATATAGGGAAGAATTTACAGTTGAATAGAATATATAACATGGATATTCAGCCTAGACTCGACTGGCCTGAACGTCCATTAGATGCAATCTCCCAAATTGTTGATTCCAATCCCAAGTTACGTAGAGTACTAAGTGGCTCAGATAGAATTGGCTTTAGCTGGAAGGAGAATGCTTTAATATATGGCAGTGGATTGAAACGTTCACACCACAGTTCAGGAGACTTGGGTTTATTATGTAAAGAGCAGCAAGTGATGCCTAAAGAAGTAGTGGATTCCTTAGTAGCTGAAGTATCTGACATGTTATCTGCTGAGAATGATGTTACTTTTAATGAATTACCTAATGACCAAGATGATTATGGATTAGACGCAATGAAATCGAGTCCAAGGTATATCCGAATTGTGAGCAAGCAGATGGTAGGGATATATGTATCTGTTTGGGTGCAGAGAAGGTTGAGAAGGCACATTAATAATTTGAAAGTTTCTCCTGTTGGAATTGGTCTAATGGGATATATGGGAAATAAGGGGTCAGTTTCAATTAGTTTGTCTCTCTTTCAGTCGCGTCTGTGCTTTGTTTGTTCCCATCTTTCTTCTGGTCAGAAGGATGGACAGAGGCGAAACTCTGATGTTCATGAAATTCTCCGACGCACTTGCTTCTCATCCGTCTTTGATCCAGATCAACCACAAACAATCTCATCTCATGATCAGATTTTCTGGTTCGGGGATTTGAATTATCGGATCAACATGTTGGATGTAGAGGTTAGAAAGTTGGTGGCTCTAAATAAGTGGGATGAACTGATGAACAGTGATCAGCTATGCAAAGAAATGCGTGCTGGGCATGTATTTGATGGATGGAAAGAGGGGTTGATAAATTTCCCACCTACTTACAAGTATGAATTTAACTCTGATAGATATGTTGGTGAGAACCCAAAAGAAGGAGAAAAGAAAAGATCTCCAGCCTGGTGCGATCGTATATTGTGGCAAGGAAAAGGAATAAAACAACTTGAATATGGGCGTGCAGAAATTAAGCTCTCAGATCATCGACCAGTTAGTTCTATTTTCTCAGTTGAAGTTGAAGTATTTGATCATCGCAAGTTAAAAAGAGCTCTAAATTTCACTAGAGCAGCAATACATCCAGAAATTTTCCTTGACGAACATGATGAATCATAA 1887 0.3906 MKARRGKRSEGFWPSLVMKKWLNVKPKVNDFSEDEVDTETESEDDASSPKYSRMRECGDNNPLKTQGTQSIFSSQTSDASCKGYKISHRRGKSETLRAQYINTKEVRVAIGTWNVAGKNPHDDLEIDEWICAEDQADIYILGFQEVVPLSAGNVLGAEDNTPIHKWEAIIRRILNKSSESESDSKHKSYSAPPSPVLRTSSAADVLADNLDANAIDMMNEEYVETVDNDLLEQPELKNIIDIGKNLQLNRIYNMDIQPRLDWPERPLDAISQIVDSNPKLRRVLSGSDRIGFSWKENALIYGSGLKRSHHSSGDLGLLCKEQQVMPKEVVDSLVAEVSDMLSAENDVTFNELPNDQDDYGLDAMKSSPRYIRIVSKQMVGIYVSVWVQRRLRRHINNLKVSPVGIGLMGYMGNKGSVSISLSLFQSRLCFVCSHLSSGQKDGQRRNSDVHEILRRTCFSSVFDPDQPQTISSHDQIFWFGDLNYRINMLDVEVRKLVALNKWDELMNSDQLCKEMRAGHVFDGWKEGLINFPPTYKYEFNSDRYVGENPKEGEKKRSPAWCDRILWQGKGIKQLEYGRAEIKLSDHRPVSSIFSVEVEVFDHRKLKRALNFTRAAIHPEIFLDEHDES 628
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal23g1265 628 PANTHER TYPE IV INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 9 8 624 IPR045849 GO:0004445|GO:0046855
Lal23g1265 628 MobiDBLite consensus disorder prediction 28 72 - -
Lal23g1265 628 Gene3D Endonuclease/exonuclease/phosphatase 313 619 IPR036691 -
Lal23g1265 628 PANTHER TYPE I INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 2 8 624 - -
Lal23g1265 628 Gene3D Endonuclease/exonuclease/phosphatase 88 191 IPR036691 -
Lal23g1265 628 SMART i5p_5 320 601 IPR000300 GO:0016791|GO:0046856
Lal23g1265 628 SUPERFAMILY DNase I-like 97 612 IPR036691 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal23g1265 Lal-Chr23 13744219 13753752 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal23g1265 370 601 Acyl Lipid Metabolism Gene Families AT1G65580 31.636 3.98e-37 146
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal23g1265 K24221 - ccaj:109800886 965.296
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal16g0856 16 5573618 5581118 Lal23g1265 23 13744219 13753752 LSH