Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g0856 ATGAAAACAAGGAGAGGAAGAAGATCAGAGGCCTTTTGGCCCTCCATTGTGATGAAGAAATGGTTAAACATAAAGCCTAAGGTATATGATTTTAGTGAAGATGAAGCGGATACTGAAACTGAAGCTGGAAGTGAAGATGATGCTTGTTCTCTTAAAGATTCAAGAATGGGCTTGCATGAAGATAATTCATGTAAAACACAACCCATATTCCCATCTCAAACATCAGGCAAGTATCAGTGTGCTCTTTGTTCTTTTACTTTTAAACCTTCAGCCATTGCTTGCCCTGGTGCAGTTTGTAAGGACTACAAGATGAGACACAGGAGAGGAAAATCAGAAACTTTGCGTGCTCAGTACATAAATAAAAAGGAAGTGAGGATAACAATAGGGACTTGGAATGTTGCTGGAAAACTTCCATGCAAGGATCTTGAGATTGAGGACTGGCTTTGTACTGAAGAGCCAGCAGATATTTACATTATTGGTTTTCAAGAGGTAGTTCCATTGAATGCTGGAAATGTACTCGGAGCAGAGGATAATACTCCAATCTCAAAATGGGAGGCAATCATAAGAAGAACTCTAAACAAATCTTCTGAACCTGAAAGTAAACACAAAAGCTACAGTGCTCCTACTTCTCCTGTACATGCTTCTGCTGCTGATGTTCTAGCAGATAGCATAGATGTTAATCCATTAAGTATAGAAACTTTTGACTATGATGATCTGGAACAACAGGAGGTGGGAAACATAATTGGTATAGGAAAGAATTTACATTTGAGAAAGATATATGGTGTTGGTGATCTTAAGACTAGACTTGACTGGCCTGAACTTCCATTAGATGCAATCCCTGAAGTAGATTCCAATCCAAAATTGAGGAGAGTATTGAGTAGCTCAGCAAGAATTGGCTTTAGCTGGATGGAGAGTAACGATTTGGTATATGGTGGCGGTGGTGGTGGTGGTGGAATGAAACGTTCGCATCATAGTTCGGGAAACTTGAGTTTGTTTTGGAAAGAGCAGCAAATGATACCTAAAGTAGCAACTGAATCACTTGATGTGTCTGACATTTTATCAGATGAGGAAGATGATGATTTTCTTGAATTACCAAATAACCAAGATGATAATGATAATGGACTAGGCAACATGAAATCGCATCGTAAGTATGTCAGGATTGTTAGTAAGCAAATGGTGGGGATATATGTATCTATTTGGGTGCAAAGGAAGTTGAGAAGGCACATCAATAATTTGAAAGTTTCTCCAGTTGGAATTGGTCTTATGGGATACATGGGCAACAAGGGGTCTGTTTCAGTTAGTATGTCTCTCTTTCAGTCACGTCTATGCTTTGTTTGTTCTCATCTGACTTCTGGTCAGAAGGATGGAGCTGAACAAAAACGAAACTCGGATGTTCATGAAATTATTCGACGCACTTGCTTCTCGTCTGTCTTCGATAAAGATCAACCACAAACAATCCCATCTCATGATAAGATTTTCTGGTTTGGAGATTTGAATTATCGTATGAATATATTGGATGCGGAGGTTCGAAAGCTAGTGGCTCTAAAGAAGTGGGATGAGCTGATGAATTATGATCAGCTAAGCAATGAATTATACAGTGGGCATGTATTTGAAGGATGGAAAGAGGGCTTAATAAACTTCCCTCCCACTTACAAGTACGAATTTAATTCTGATAAATATTTTGGTGAGAACCCAAAAGAAGGGGAAAAGAAAAGATCTCCAGCCTGGTGTGATCGTATTTTGTGGCTAGGAAAAGGAATAAAGCAACTTAAATATGGGAGTGCATCAAATAAGCTCTCAGATCATAGACCAGTTAGTTCAATATTCTTGGTTGATGTTGAAGTATTTGATCATCGCAAGTTACAAAGAGCTCTAAATTTTACTAGTACTGCAGTGCACCCAGAGCCAGAGGTCTACTTTATGGATGATGATGACTTCCAATCATACTAA 1950 0.3882 MKTRRGRRSEAFWPSIVMKKWLNIKPKVYDFSEDEADTETEAGSEDDACSLKDSRMGLHEDNSCKTQPIFPSQTSGKYQCALCSFTFKPSAIACPGAVCKDYKMRHRRGKSETLRAQYINKKEVRITIGTWNVAGKLPCKDLEIEDWLCTEEPADIYIIGFQEVVPLNAGNVLGAEDNTPISKWEAIIRRTLNKSSEPESKHKSYSAPTSPVHASAADVLADSIDVNPLSIETFDYDDLEQQEVGNIIGIGKNLHLRKIYGVGDLKTRLDWPELPLDAIPEVDSNPKLRRVLSSSARIGFSWMESNDLVYGGGGGGGGMKRSHHSSGNLSLFWKEQQMIPKVATESLDVSDILSDEEDDDFLELPNNQDDNDNGLGNMKSHRKYVRIVSKQMVGIYVSIWVQRKLRRHINNLKVSPVGIGLMGYMGNKGSVSVSMSLFQSRLCFVCSHLTSGQKDGAEQKRNSDVHEIIRRTCFSSVFDKDQPQTIPSHDKIFWFGDLNYRMNILDAEVRKLVALKKWDELMNYDQLSNELYSGHVFEGWKEGLINFPPTYKYEFNSDKYFGENPKEGEKKRSPAWCDRILWLGKGIKQLKYGSASNKLSDHRPVSSIFLVDVEVFDHRKLQRALNFTSTAVHPEPEVYFMDDDDFQSY 649
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g0856 649 PANTHER TYPE I INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 2 7 636 - -
Lal16g0856 649 PANTHER TYPE IV INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 9 7 636 IPR045849 GO:0004445|GO:0046855
Lal16g0856 649 SUPERFAMILY DNase I-like 115 629 IPR036691 -
Lal16g0856 649 Gene3D Endonuclease/exonuclease/phosphatase 343 637 IPR036691 -
Lal16g0856 649 Gene3D Endonuclease/exonuclease/phosphatase 104 211 IPR036691 -
Lal16g0856 649 SMART i5p_5 318 617 IPR000300 GO:0016791|GO:0046856
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal16g0856 Lal-Chr16 5573618 5581118 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal16g0856 373 582 Acyl Lipid Metabolism Gene Families AT2G31830 34.874 3.89e-35 140
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal16g0856 K24221 - gmx:100807214 949.503
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal16g0856 16 5573618 5581118 Lal23g1265 23 13744219 13753752 LSH