Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal23g1248 ATGGGTCGTAAGCATGATGAACCAAACTCTGCTCTCTCAAACCGTTTGATTCTCTTTTTCATTTGTTTTGTTTCTTGCGGCATAGTCTACACATTCCTCTCATCATTTTCCGAGTTTGGTTCCTCATTGCCACCGCTTCAAGTTAAGCAGAATGTTAAAGGGTGTTGCAGGGGGATTGAAAATTTGGAGCTTTGGGGTGCAGCTGTGAAATGGGGTTCTCAGTTTAAATTAAACACTTCCCAAGGTTGCTGTGAAGCGTGTAAATCAATGTGCACTGGGAATGATGGGCCATGCTTGTGTGACACGTGGGTGTTTTGTGGAAATCGTGAAAAGTGTGGACCCAAGTTTGGTGAGTGTTGGTTGAAGAAACAAAAGGACAGCTTAGCCCCTGAAGTCAAAACTGGTGCTGGTCCAGGGAAAATAGTTAGTTGGACTTCTGGTCTCATCTTTGGGAAAGGAGAGGGTATTATTCGGTTGGAAACTGAATATGGAGCTCTTCATATTAAACTTTTCCCCGACTCTGTCCCCCACTCTGTTGCCTACATTCTAGAATTGTTGACTTTGCGACATTGTGCAGGGTGCCGATTTTACCGTGCAGAGAGCCGAGGTCAATCATGGGATTCAGAAGGAAACCATATAGAAAATGCTGCTTTTGGCCCCCCTCATGCCTTGATTCAAGGGATACTTGAAGCACAAGGCACCCCATTCAAGAAACTACCCATTGAAGATTGTCCAACATTGAGAAGGGGCTCAGTTGCTTGGATTGGTTCTGGACCAGAATTCTTTATTAGCTTAGCTAACCATGCAGAGTGGGAAAACAAATACACTGTCTTTGGTTCTGTTCTTCCAGAAGACATGCATATTGCTGAGAAAATCTCTACACTCCCCACACTATCTGATGTTTGGAATAATGTTAATGTGACTGTTTTGGAAAAACCAGTTCCATTGAGGTTGAGCAGAGTCAAGAAAAACGATGAAGATTGA 984 0.435 MGRKHDEPNSALSNRLILFFICFVSCGIVYTFLSSFSEFGSSLPPLQVKQNVKGCCRGIENLELWGAAVKWGSQFKLNTSQGCCEACKSMCTGNDGPCLCDTWVFCGNREKCGPKFGECWLKKQKDSLAPEVKTGAGPGKIVSWTSGLIFGKGEGIIRLETEYGALHIKLFPDSVPHSVAYILELLTLRHCAGCRFYRAESRGQSWDSEGNHIENAAFGPPHALIQGILEAQGTPFKKLPIEDCPTLRRGSVAWIGSGPEFFISLANHAEWENKYTVFGSVLPEDMHIAEKISTLPTLSDVWNNVNVTVLEKPVPLRLSRVKKNDED 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal23g1248 327 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASES 1 324 - -
Lal23g1248 327 SUPERFAMILY Cyclophilin-like 152 309 IPR029000 -
Lal23g1248 327 Gene3D - 150 313 IPR029000 -
Lal23g1248 327 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 157 306 IPR002130 GO:0000413|GO:0003755
Lal23g1248 327 PANTHER EXPRESSED PROTEIN 1 324 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal23g1248 Lal-Chr23 13626922 13632381 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal23g1248 - - gmx:100800178 547.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal23g1248 23 13626922 13632381 Lal23g1248 23 13626922 13632381 ECH
Lal16g0301 16 1821764 1827363 Lal23g1248 23 13626922 13632381 LSH