Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g0301 ATGGGTCGCAAGCATAATGAACCAAACTCCACTCTCTCAAACCGTTTATTCCTCTTGTTCGCGTGCTTCTTTTCTTGCGGTTTAGTCTACACCTTCCTTTCCCCATTCTTCATATCCTCTTCGGTTTCAGAATTTGGTTCGTCATTGGCATCGGTTCATGGTACTCGTAATGTTGGAGGATGTTGTAGAGGGATTGAAAGTTTGGAACTTTGGGGTGCGTCAGTGAAATGGGGTTCTGAGTTTAAATTCAACACTTCCCGAGGTTGTTGCGAAGCGTGTAAATCTATGTGCACTGGGAAAGATGGACCATGTTTGTGTGACACGTGGGTCTTTTGTGGGAACCGTGAAACTTGTGGATCCAAGTTTGGTGAGTGTTGGTTGAAGAAACAAAAGGATAGCTTAGCCCCTGAACGCCAAGATGGTGTGCCTCCAGGGGAAATGGTTAGTTGGACTTCTGGTCTCATCTTTGGGAAAGGAGAGGGTATTATTCTGTTGGAAACTGAATATGGAGCTCTTCATATTAAACTTTTCCCTGACTGTGCCCCCCACTCTGTTGCCTACATTCTAGAATTGTTGGCTTTGAGTCATTGTGCAGGCTGTCAATTTTACCGTGCAGAGAACCGAGGTCAATCTTGGGATTCAGAAGGAAACCATATAGAAAATGCTGCTTTTGGTCCCCCTTATGCATTGATTCAAGGGGTGCTTGAAGCACAAGGCACCCCTTTCAAGAAACTTCCAATTGAAGACTGTCCAACATTAAGAAGGGGTTCAGTTGCCTGGATTGGTTCTGGTCCAGCATTCTTTATTAGCCTAGCTAACCATGCAGAGTGGAAAAACGAATACACTGTGTTTGGTTCTGTTCTTCCAGAAGATATGCATATTGCTGAGAAAATTGCTACACTCCCCACAATATCTGATGTTTGGAACAATGTTAATGTGACCGTTTTGGAAAAACCAGTTCCTTTGTTGTTGGGAAGAGTCAAGAAAAGCCATGAAGATTGA 1002 0.4381 MGRKHNEPNSTLSNRLFLLFACFFSCGLVYTFLSPFFISSSVSEFGSSLASVHGTRNVGGCCRGIESLELWGASVKWGSEFKFNTSRGCCEACKSMCTGKDGPCLCDTWVFCGNRETCGSKFGECWLKKQKDSLAPERQDGVPPGEMVSWTSGLIFGKGEGIILLETEYGALHIKLFPDCAPHSVAYILELLALSHCAGCQFYRAENRGQSWDSEGNHIENAAFGPPYALIQGVLEAQGTPFKKLPIEDCPTLRRGSVAWIGSGPAFFISLANHAEWKNEYTVFGSVLPEDMHIAEKIATLPTISDVWNNVNVTVLEKPVPLLLGRVKKSHED 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g0301 333 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 164 313 IPR002130 GO:0000413|GO:0003755
Lal16g0301 333 Gene3D - 156 319 IPR029000 -
Lal16g0301 333 PANTHER EXPRESSED PROTEIN 1 330 - -
Lal16g0301 333 SUPERFAMILY Cyclophilin-like 158 316 IPR029000 -
Lal16g0301 333 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASES 1 330 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal16g0301 Lal-Chr16 1821764 1827363 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal16g0301 - - gmx:100800178 576.63
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal16g0301 16 1821764 1827363 Lal16g0301 16 1821764 1827363 ECH
Lal16g0301 16 1821764 1827363 Lal23g1248 23 13626922 13632381 LSH