Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal23g1238 ATGATGATGCAGATGAGCTCCGCCGCCACCGTACCAGCTCACAAGTTTCAGTTTCAAGCAAGATGTCCAAGTTTCAGGTTCAGATGCGAATCCTCCTCCATCAAACCACCGTCAATCACCGACTCCACACGGTTGCACCTTACCAACCTCAACAACCTCCTAGAAAAACAAAACCCTCTCAGTGTCCCCACCACCCAACATCACCTCAACCAACAACAACCTATCCACAATAACGAGTCAAGGGATAATAATAATAGCAAGAAAGGAAGAAGCATGCTTGAAAATCTCAACCTTGGAATACTATGGCCGGAGATGAAAGTCGCCGATGAAATGTCCCCCGGACACCTCTTCCGCCTGCAGAGGCTGCTCTCAATGACGGCGGAATATTCTCCGAGAAACGTCATCGGAAGCCGGTGGATGGAATACCACGGAAGCAACGATTGGAAAGGGATGCTTGATCCTCTCGATGAAAATCTCCGGCGAGAGGTTATCAGGTACGGCGAGTTTGTTCAAGCAGCGTATCACGCTTTCCACACAGATCCCGCCATGTCACAAACGGAGCCACCGAAGAAGACCCAACACGTGGCATTATCTGACAGCTCCTACAGGGTTACAAAGAGCCTCTATGCCACGTCATCTATTGGGTTACCCAAATGGGTCGATGGTGTTGCTCCGAGTCTGAGTTGGATGACTCAGCGATCAAGCTGGGTCGGATACGTCGCCGTTTGTGAAGACAGAAGGGAAATTGCTAGAATGGGAAGAAGAGATATTGTTATCTCTCTTCGTGGAACTTCCACGTGTCTTGAATGGGCCGAAAATGCTAGGACTCATTTAATCGACATATCGGAAAATGATTCAAAAGCCCAAGGAAAACCCAAAGTTCAGTGCGGGTTCTTGAGCCTATACAAGACCAGAGGGGCTCACGTGCCTAGTCTATCGGAATCAGTGGTGGAAGAAGTGAAACGACTAATAGATGTTTACAAAGGTGAAAAGCTAAGTATAACGGTTACAGGACATAGCCTTGGTGCTACACTAGCATTGTTAGTCGCTGATGAGATAAGCACGTGCAGGCCTGATGTTCCACCAGTTGCTGTTTTTTCTTTTGGTGGGCCTCGTGTAGGTAATAAAGCCTTCGGGAACCGCATTACTGCAAAAAATGTGAAAGTGTTAAGAATAGTGAACTCTCAAGACGTGATTACTAGAGTCCCGGGTATATTTGTTAGTGACGAGCTTGAGCAAAAAATTAAGAACTCTAAGGTGAAAGGTATAGTGGATATGTTAGAACAGAACACACCATTAGGATACTCACATGTTGGGGTTGAGCTACGTGTCAATACTAAGATGTCGCCATACCTTAAACCTGATGCTGACATGGCTTGTTGTCACGATTTGGAGGCTTACTTGCACTTGGTGGATGGGTTCATGGCATCTAATTGTCCCTTCAGGTCAAATGCCAAGAGGAGTTTGGCTAGATTAATGCAGGATCAAGGTTCTAATGTAAAAAAGTTATATATTAGTAAGGCAAAAGGCTTGACTGTGAATTTCAAGAGACAAGAATCCATGTTAATGCCTACTTGTTTGCCTAGTCCGTCTTAA 1596 0.458 MMMQMSSAATVPAHKFQFQARCPSFRFRCESSSIKPPSITDSTRLHLTNLNNLLEKQNPLSVPTTQHHLNQQQPIHNNESRDNNNSKKGRSMLENLNLGILWPEMKVADEMSPGHLFRLQRLLSMTAEYSPRNVIGSRWMEYHGSNDWKGMLDPLDENLRREVIRYGEFVQAAYHAFHTDPAMSQTEPPKKTQHVALSDSSYRVTKSLYATSSIGLPKWVDGVAPSLSWMTQRSSWVGYVAVCEDRREIARMGRRDIVISLRGTSTCLEWAENARTHLIDISENDSKAQGKPKVQCGFLSLYKTRGAHVPSLSESVVEEVKRLIDVYKGEKLSITVTGHSLGATLALLVADEISTCRPDVPPVAVFSFGGPRVGNKAFGNRITAKNVKVLRIVNSQDVITRVPGIFVSDELEQKIKNSKVKGIVDMLEQNTPLGYSHVGVELRVNTKMSPYLKPDADMACCHDLEAYLHLVDGFMASNCPFRSNAKRSLARLMQDQGSNVKKLYISKAKGLTVNFKRQESMLMPTCLPSPS 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal23g1238 531 Pfam Lipase (class 3) 258 405 IPR002921 GO:0006629
Lal23g1238 531 SUPERFAMILY alpha/beta-Hydrolases 227 474 IPR029058 -
Lal23g1238 531 Gene3D alpha/beta hydrolase 138 520 IPR029058 -
Lal23g1238 531 MobiDBLite consensus disorder prediction 65 90 - -
Lal23g1238 531 PANTHER GLYCEROLIPASE A1 3 517 - -
Lal23g1238 531 MobiDBLite consensus disorder prediction 65 80 - -
Lal23g1238 531 CDD Lipase_3 190 472 - -
Lal23g1238 531 PANTHER PHOSPHOLIPASE A1-IBETA2, CHLOROPLASTIC 3 517 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal23g1238 Lal-Chr23 13572122 13573717 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal23g1238 26 531 Acyl Lipid Metabolism Gene Families AT4G16820 55.192 0.0 548
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal23g1238 - - gmx:100806573 783.482
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal16g0881 16 5781423 5784213 Lal23g1238 23 13572122 13573717 LSH
Lal23g1238 23 13572122 13573717 Lal13g0357 13 2249629 2255329 PCT
Lal23g1238 23 13572122 13573717 Lal24g0284 24 2049762 2055758 PCT