Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g0881 ATGATGCAGATGCACATGATAAGTTCTACCATACCAGCACACAATCTTCACATGTTTCAAACAAGAAGAGCCAGCTTTACATGCCAAGCCTCTCCCTTGAACCCATCACGCGCCGCCACTGGTTCCACCAGGTTACACCTCTCTAACCTTGACAAGCTCCTTCAAAAGCAATCTGATGAATCATCAACCCAACTCAACCATGAACAGAATCTACAAGAAAAACAAAACCATACATCAACAACCATAACAGAAAAGAAAGGAAAAAGTGCACTTGAAGGTCTTAACCTAGCTAGGTTGTGGCCGGAGATGAAGGCGGCCGAGGAAATGTCACCACGCCACCTCAACCGCCTCCAACGGCTGCTTTCCATGTCGGCGGAGCATTCTCCAAGAAATGTCCTTGGGAGCATGTGGAGGGAGTATCATGGTAGCAATGACTGGAAAGGTATGCTTGACCCTTTGGATGAAAATCTTCGCCGTGAAGTGGTTCGCTACGGCGAGTTTGTGCAAGCTGCATACCATTCCTTCCATTCTAATCCCACCATGTCATCGGAGGAGCCTCCGGTACCACGACACGTGGTGGTACCGGATAGATCCTATAGGGTGACTAAGAGCCTTTATGCCACGTCATCAATTGGGTTACCTGGATGGGTTGATGACATGGCACCTAATCTGGGATGGATGACTCAAAGATCTAGTTGGATTGGATATGTGGCCGTTTGTGATGATCGTAGGGAGATTGCACGGTTGGGTCGAAGAGACATTGTAATCTCTCTTCGTGGAACGGCCACATGTCTTGAATGGGCCGAGAACATGAGGGTTCATTTGATCGACATGTCAGAAGATGAAAGTTTAAATGTTCAAGAAAAGTCTAAGGTGGAACATGGGTTCCTAAGTCTATATAAGACTCGAGGGACCCATGTTCCAAGCTTGGCCGAGTCGGTAATCGAGGAGGTAAAGCGACTGATGGAGGTGTACAAGGGTGAGGCCCTAAGCATCACAATTACTGGGCACAGCCTTGGTGCAGCACTAGCCTTATTGGTGGCTGATGAAATTAGCACTTGTAGCCAAGAAATGCCACCTGTGGCTGTTTTTTCCTTTGGTGGGCCAAGGGTGGAGCTTGAACAAAATTTGAGGAGCTCTAAGATTGGTGGTGTTCTTGACATGTTGGATGACAACCTAGCTTACACACATGTCGGCACTGAGCTACGTGTCGATACGAAGATGTCGCCGTATTTGAAGCCGGATGCTGACATGGCATGTTGCCATGACTTGGAGGCCTACCTTCACTTGGTGGATGGGTTCCTAGCTTCTAATTGTCCATTCAGAGCAAATGCTAAGAGAAGCTTAGTTAGATTAATGCAAGATCAAAGTGCAAATGTAAAGAAATTGTATACAAGTAAGGCTAAAGCCTTGAGTTTAAGTCCTGAGAGACAAGGATCATCCTTTTCTAGACAAGGATCATCCTTTTCTAGACAAGGATCATTCTCTATAATCTTGGGAATCTTGAACATGCTCGACCATAAGGCTGTGAAGGAGATTGGCGTGTGTCTTGGAAGCGTAGGTGTGACTGTAGCGATTGCTCAGAGACATGGCTTTAAAGAAATCGGTGACATGGAACGCTATTGGTTGCTGGTTATGTTGAAAATGGCGGGGCAGAAGATGGGTTAA 1668 0.4658 MMQMHMISSTIPAHNLHMFQTRRASFTCQASPLNPSRAATGSTRLHLSNLDKLLQKQSDESSTQLNHEQNLQEKQNHTSTTITEKKGKSALEGLNLARLWPEMKAAEEMSPRHLNRLQRLLSMSAEHSPRNVLGSMWREYHGSNDWKGMLDPLDENLRREVVRYGEFVQAAYHSFHSNPTMSSEEPPVPRHVVVPDRSYRVTKSLYATSSIGLPGWVDDMAPNLGWMTQRSSWIGYVAVCDDRREIARLGRRDIVISLRGTATCLEWAENMRVHLIDMSEDESLNVQEKSKVEHGFLSLYKTRGTHVPSLAESVIEEVKRLMEVYKGEALSITITGHSLGAALALLVADEISTCSQEMPPVAVFSFGGPRVELEQNLRSSKIGGVLDMLDDNLAYTHVGTELRVDTKMSPYLKPDADMACCHDLEAYLHLVDGFLASNCPFRANAKRSLVRLMQDQSANVKKLYTSKAKALSLSPERQGSSFSRQGSSFSRQGSFSIILGILNMLDHKAVKEIGVCLGSVGVTVAIAQRHGFKEIGDMERYWLLVMLKMAGQKMG 555
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g0881 555 MobiDBLite consensus disorder prediction 57 86 - -
Lal16g0881 555 MobiDBLite consensus disorder prediction 57 87 - -
Lal16g0881 555 PANTHER GLYCEROLIPASE A1 6 371 - -
Lal16g0881 555 PANTHER GLYCEROLIPASE A1 372 477 - -
Lal16g0881 555 Coils Coil 547 555 - -
Lal16g0881 555 Pfam Lipase (class 3) 255 371 IPR002921 GO:0006629
Lal16g0881 555 SUPERFAMILY alpha/beta-Hydrolases 227 433 IPR029058 -
Lal16g0881 555 PANTHER PHOSPHOLIPASE A1-IBETA2, CHLOROPLASTIC 6 371 - -
Lal16g0881 555 PANTHER PHOSPHOLIPASE A1-IBETA2, CHLOROPLASTIC 372 477 - -
Lal16g0881 555 Gene3D alpha/beta hydrolase 136 487 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal16g0881 Lal-Chr16 5781423 5784213 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal16g0881 15 488 Acyl Lipid Metabolism Gene Families AT4G16820 52.863 1.45e-173 499
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal16g0881 - - gmx:100778514 711.064
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal16g0881 16 5781423 5784213 Lal23g1238 23 13572122 13573717 LSH
Lal16g0881 16 5781423 5784213 Lal13g0357 13 2249629 2255329 PCT
Lal16g0881 16 5781423 5784213 Lal24g0284 24 2049762 2055758 PCT