Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal23g1131 ATGACCGCTTCTAACGCTTACTTTTCTTGTTTTCCTTTTTGTTCTTTCTCTTCTCTGAGTAAGACTAAGACTATGTCTATTCTCTCTCCCTCGTTTTCCACACTCTTTCCTACTCCCACTCTTAGGGTTTCTTCTTCATCATTTTATTCAAGATCTGTAACCGCTTCTTCACCTGTTCTTGCTGTTTCTTCTTCTTCTTCTTCTTCCTCACTCTTCTCTATCAAAGGCGAAGACAACGCTTCTTCACAAAAGGATTATTTTCCCGCCAAAATGTCCGCAACCGTTTCTTCTCGCACTTTCCTTGACGCTCAAAACGAACAAGAGCTTCTTTATGGAATAAGGAAGGAAGTAGAAGCAGGATCCCTGCCTCCTAGTGTTGCTGCAGGGATGGAAGAACTGTACAAGAACTACAAAAGTGCTGTTTTCCAAAGTGGAGATCCAAAGGCAGATGAGACTGTATTGTCAAATATGTCTGGTCTTTTAGATCGCATATTTTTGGATGTGACGGATCCTTTTGTCTTTCAACCACACCACAAAGCGAAGAGAGAGCCTTTTGATTACTACATGTTTGGTCAAAATTACATCCGCCCTTTAGTTGATTACAGAAATTCTTATGTTGGCAACATGTCCCTTTTCATTGAAATAGAAGAGAAACTTAAGCAGGGACACAATATCATCTTGATGTCAAATCACCAAACTGAAGCAGATCCAGCAGTTATTTCGCTACTGCTTGAAAAGCGACTATCATATATTGCTGAAAACTTGACTTACGTAGCAGGAGATAGAGTTTTAACCGATCCTCTGTGCAAGCCCTTCAGTATTGGCAGGAATCTCATTTGTGTTTACTCTAAAAAGCACATGCTTGATGATCCGGAACTTATAGAGATGAAGAGAAAAGCAAACACACGAAGTCTGAAGGAGATGGCTATGCTTTTAAGGAGTGGATCACAATTAATCTGGATTGCCCCAAGTGGCGGTAGGGATCGACCAGATCCCACCAATGGAGAATGGGTTCCGGCACCCTTCGATACTTATTCAGTAGATAATATGCGAAGGCTTGTTGACCATTCTGGTCCACCAGGTCATGTATATCCTTTGGCAATATTGTGCCATGATATAATGCCCCCTCCAATGAAGGTTGAAAAGGAAATTGGGGAGAAAAGAATTATTTCTTTTCATGGGACTGGCTTATCAGTGGGTCCAGAGATAATCTTCTCTGAAACAACTGCTGCTTGTAAAAGTCCGGAAAAGGCTAAGGAAGCATATTCCAAAGCAGTATACATTTCTGTGAATGAGCAATATAATGTGCTAAAATCTGCAATACACAGCAAAAAAGGATTAGAAGCATCAACTCATAAAGTTTCTTTGTCGCAGCCATGGAACTAA 1386 0.4076 MTASNAYFSCFPFCSFSSLSKTKTMSILSPSFSTLFPTPTLRVSSSSFYSRSVTASSPVLAVSSSSSSSSLFSIKGEDNASSQKDYFPAKMSATVSSRTFLDAQNEQELLYGIRKEVEAGSLPPSVAAGMEELYKNYKSAVFQSGDPKADETVLSNMSGLLDRIFLDVTDPFVFQPHHKAKREPFDYYMFGQNYIRPLVDYRNSYVGNMSLFIEIEEKLKQGHNIILMSNHQTEADPAVISLLLEKRLSYIAENLTYVAGDRVLTDPLCKPFSIGRNLICVYSKKHMLDDPELIEMKRKANTRSLKEMAMLLRSGSQLIWIAPSGGRDRPDPTNGEWVPAPFDTYSVDNMRRLVDHSGPPGHVYPLAILCHDIMPPPMKVEKEIGEKRIISFHGTGLSVGPEIIFSETTAACKSPEKAKEAYSKAVYISVNEQYNVLKSAIHSKKGLEASTHKVSLSQPWN 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal23g1131 461 Pfam Acyltransferase 213 368 IPR002123 GO:0016746
Lal23g1131 461 SUPERFAMILY Glycerol-3-phosphate (1)-acyltransferase 97 460 - -
Lal23g1131 461 CDD LPLAT_GPAT 202 437 - -
Lal23g1131 461 Pfam Glycerol-3-phosphate acyltransferase N-terminal 97 172 IPR023083 GO:0004366
Lal23g1131 461 SMART plsc_2 225 371 IPR002123 GO:0016746
Lal23g1131 461 Gene3D - 95 170 IPR038114 -
Lal23g1131 461 Gene3D - 171 452 - -
Lal23g1131 461 PIRSF G3POAT 3 461 IPR016222 GO:0004366|GO:0006650
Lal23g1131 461 PANTHER GLYCEROL-3-PHOSPHATE ACYLTRANSFERASE, CHLOROPLASTIC 55 461 IPR016222 GO:0004366|GO:0006650
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal23g1131 Lal-Chr23 12831300 12843260 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal23g1131 97 461 Acyl Lipid Metabolism Gene Families AT1G32200 72.055 0.0 582
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal23g1131 K00630 - gmx:100789434 652.129
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal23g1131 23 12831300 12843260 Lal23g1131 23 12831300 12843260 ECH
Lal15g0382 15 2573249 2582120 Lal23g1131 23 12831300 12843260 LSH