Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal15g0382 ATGGCCACCACCGTTTCTTCCCGCACTTTCCTCCACGCTAAAAACGAACAAGAGATTCTTTCCGGAATAACGAAGGAAGTAAAAGCAGGATCCCTGCCCCCTAATGTTGCTGCGGGGATGGAAGAAATTTACAAGAACTATAAAAATGCTGTTTTCGAAAGTGGAGATCCCAAGGCAAATGAGACTGTATTGTCAAATATGACTGCTTTTCTAGATCTTATATTTTTGGATGTGACGGATCCTTTTGTCTTTCAACCACACCACAAAGCAAAGAGAGAGCCTTTTGACTACTACATGTTTGGTCAAAATTATATCCGCCCTTTAGTTGATTACAGAAATTCTTATGTCGGCAACATGTCCCTGTTCATTGAAATAGAAGAGAAACTTAAGAAGGGACACAATATCATCTTCATGTCAAATCACCAAACTGAAGCAGATCCAGCAATTATTTCACTGTTGCTTGAAAAGCGACTGCCATATGTCGCTGAAAACATTACCTATGTAGCAGGAGATAGAGTTGTAACTGATCCTGTGTGCAAACCCTTCAGTATTGGCAGGAATCTCATTTGTGTTTACTCTAAAAAGCACATGCTTGATGATCCAGAACTTATGGAGATGAAAAGAAAAGCAAACACACAAAGTCTGAAGGAGATGGCTGTGCTTTTAAGGGGTGGATCACAACTAATCTGGATTGCCCCAAGTGGTGGTAGGGATCGACAAGATCCCCACACTGGAGAATGGGCGCCGGCACCCTTTGATGCTTCTTCAGTCGATAACATGCGAAGGCTTGTTGACCATTCTGGTCCACCAGGTCATGTATATCCTTTGGCAATATCGTGCCATGAGATAATGCCCCCTCCAATGAAGGTTGAAAAAGAAATTGGGGAGAAAAGAATTATTTCTTTTCATGGAACTGGCTTATCAGTTGCTCCAGAGATAAGCTTTTCTGAAACCACTGCTGCTTGTGGAAGTCCAGAAAAGGCTAAGGAATCATATTCAAAAGCCTTGTACGATTCCGTGAATGAGCAATATAATGTGCTAAAATCTGCAATACGAGGCAAAAAAGGATTAGAAGCATCAACTCCTAAAGTTTCTTTGTCACAGCCATGGAACTAG 1116 0.4158 MATTVSSRTFLHAKNEQEILSGITKEVKAGSLPPNVAAGMEEIYKNYKNAVFESGDPKANETVLSNMTAFLDLIFLDVTDPFVFQPHHKAKREPFDYYMFGQNYIRPLVDYRNSYVGNMSLFIEIEEKLKKGHNIIFMSNHQTEADPAIISLLLEKRLPYVAENITYVAGDRVVTDPVCKPFSIGRNLICVYSKKHMLDDPELMEMKRKANTQSLKEMAVLLRGGSQLIWIAPSGGRDRQDPHTGEWAPAPFDASSVDNMRRLVDHSGPPGHVYPLAISCHEIMPPPMKVEKEIGEKRIISFHGTGLSVAPEISFSETTAACGSPEKAKESYSKALYDSVNEQYNVLKSAIRGKKGLEASTPKVSLSQPWN 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal15g0382 371 Pfam Glycerol-3-phosphate acyltransferase N-terminal 7 82 IPR023083 GO:0004366
Lal15g0382 371 SUPERFAMILY Glycerol-3-phosphate (1)-acyltransferase 7 370 - -
Lal15g0382 371 Pfam Acyltransferase 123 279 IPR002123 GO:0016746
Lal15g0382 371 Gene3D - 81 362 - -
Lal15g0382 371 PIRSF G3POAT 1 371 IPR016222 GO:0004366|GO:0006650
Lal15g0382 371 PANTHER GLYCEROL-3-PHOSPHATE ACYLTRANSFERASE, CHLOROPLASTIC 4 371 - -
Lal15g0382 371 SMART plsc_2 135 281 IPR002123 GO:0016746
Lal15g0382 371 Gene3D - 5 80 IPR038114 -
Lal15g0382 371 CDD LPLAT_GPAT 112 347 - -
Lal15g0382 371 PANTHER GLYCEROL-3-PHOSPHATE ACYLTRANSFERASE, CHLOROPLASTIC 4 371 IPR016222 GO:0004366|GO:0006650
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal15g0382 Lal-Chr15 2573249 2582120 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal15g0382 7 371 Acyl Lipid Metabolism Gene Families AT1G32200 69.863 0.0 568
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal15g0382 K00630 - gmx:100789434 634.795
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal15g0382 15 2573249 2582120 Lal15g0382 15 2573249 2582120 ECH
Lal15g0382 15 2573249 2582120 Lal23g1131 23 12831300 12843260 LSH