Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal23g1034 ATGGGAGAGACCACTGCTGTTTCCAATTCTGCTTTGCAAGAGTCTGTTTCATTTGGTAGATTTGAGAATGAATCTTTGTCTTGGGAAAGATGGTCTTCTTTCTCTCCAAACAAGTATTTGGAAGAGGTTGAGAAATGTGCCACACCTGGATCTGTAGCACAGAAAAAAGCTTACTTTGAAGCACATTACAAGAAGATTGCTGCCCGGAAAGTCGAGTTGCTGGCTGAACAGAAGCAAGGAAATGAAGAATCTTTCGGATCAGAAGATCAAAACCATTTAGATCTGGGTGGTAGCAGTTGTGTGACTGAAGCAGAATTTGATATATCCAACACTCAAGATTCCGTTGAAGGGGTTAAGCACAAAACCCGCTCTTTTGGCGAGACCAGTAGGACCGAGTTGGATAATTTGAAGGAGGAAGTTGCAATTTCAAGAGATTGTCCAAGTTCATTAGTTGAGGGAGAGAACAAAGAACTAGAATGCAGATCACATAGTTTCCTCCAGATTGATAAAACTGAAGAAGCTGTCTGCATCAAACAAGTAGAAGATCATAACATTGAAGCTGAACATGTGAAGGAGATTTCACATGTTGTGTACAAGGAGGAGAAAAAGCCATCCCATATTGAAGCAAAAGAGGTGAAATTGGATCGTCCGAAGAAACATAAGGTTACTACCATAGATAGGGAAAGCATTGGAGCCAAGACGAAGAAGAAATCAATGCTACCTTCAGCTAAGGCATCCCAAATTTCCATGCAGAGAAGTTCAAAGCCTGCATCAACACCAACAAAAATATTGGCATCTTCCCTTTCAACTAAAAAGGGAACTTCTCCATATTCATCTAGCAGGCCATTTACTTCTGATGTGGAGAGCAGAAAAGCTTCTAAAAAATCTTTCCACATGTCCATGAGCTTGGGTCTAAGTAATCCTGATCCAGCTCCTCATACCACAATGAGGAAATCATTCATTATGGAGAAAATGGGGGATAAGGACATAGTCAAGCGAGCATTTAAGACATTCCGGAACAATTTCAACCAGCTGGAAACTTCTGGTGAAGACAAATCTTTAGTAAAAAAGCAGATTGCTTCAGGGGGGACAGTGTCGAAGGTTCCAACATCTACAGCTTTGCGGAAAGAAAATGGACGGCCTACTAAGGTTGACAGTGTGGATAAAAGAAGTGGAAGTTCTGTAGGAGCTACTATTGGACCAAAAAGTGACATTAGAGCTGAAAAAAAGGAAGAGTCTTCAAGAAAAATAAAGGACAAATCTAATGCAAAAGCAGTAGAAAGGACCCGTCTTCAATTAAAATTGAAGGAGGAAAAAGAAGCAGAGAGGAAAAAGCTAAAACATAATTTCAAGGCCACACCCCTACCGGCTTTTTATCGGGGTCAAAAAGTATCAAAAGGTCACCCATTAAAGGGAGATGAACAGCCGATAGCCACGCAAGTGGTGTAA 1449 0.4092 MGETTAVSNSALQESVSFGRFENESLSWERWSSFSPNKYLEEVEKCATPGSVAQKKAYFEAHYKKIAARKVELLAEQKQGNEESFGSEDQNHLDLGGSSCVTEAEFDISNTQDSVEGVKHKTRSFGETSRTELDNLKEEVAISRDCPSSLVEGENKELECRSHSFLQIDKTEEAVCIKQVEDHNIEAEHVKEISHVVYKEEKKPSHIEAKEVKLDRPKKHKVTTIDRESIGAKTKKKSMLPSAKASQISMQRSSKPASTPTKILASSLSTKKGTSPYSSSRPFTSDVESRKASKKSFHMSMSLGLSNPDPAPHTTMRKSFIMEKMGDKDIVKRAFKTFRNNFNQLETSGEDKSLVKKQIASGGTVSKVPTSTALRKENGRPTKVDSVDKRSGSSVGATIGPKSDIRAEKKEESSRKIKDKSNAKAVERTRLQLKLKEEKEAERKKLKHNFKATPLPAFYRGQKVSKGHPLKGDEQPIATQVV 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal23g1034 482 PANTHER F3I6.9 PROTEIN 1 469 - -
Lal23g1034 482 MobiDBLite consensus disorder prediction 359 482 - -
Lal23g1034 482 MobiDBLite consensus disorder prediction 403 449 - -
Lal23g1034 482 PANTHER F3I6.9 PROTEIN 1 469 - -
Lal23g1034 482 MobiDBLite consensus disorder prediction 201 234 - -
Lal23g1034 482 Pfam Targeting protein for Xklp2 (TPX2) domain 402 466 IPR027329 -
Lal23g1034 482 MobiDBLite consensus disorder prediction 240 286 - -
Lal23g1034 482 MobiDBLite consensus disorder prediction 299 313 - -
Lal23g1034 482 MobiDBLite consensus disorder prediction 201 315 - -
Lal23g1034 482 MobiDBLite consensus disorder prediction 359 377 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal23g1034 Lal-Chr23 12129616 12134373 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal23g1034 - - gmx:100810690 578.556
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal23g1034 23 12129616 12134373 Lal23g1034 23 12129616 12134373 ECH
Lal16g0571 16 3678919 3683507 Lal23g1034 23 12129616 12134373 LSH
Lal15g0513 15 3541322 3546539 Lal23g1034 23 12129616 12134373 LSH