Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g0571 ATGGGAGAGACTACTGGTGTTTCTAATTCTGCTTTGCAAGTATCTGTTTCATTTGGTAGATTTGAGAACGAATCTCTGTCTTGGGAAAAATGGTCTTCTTTCTGTCCAAATAAGTACCTGGAAGAGGTTGAGAAATGTGCCACACCTGGATCTGTTGCACAGAAAAAAGCTTACTTTGAAGCACATTACAAGAAGATTGCTGCCCGGAAAGCTGAATTGCTGGCTCAAGAGAAGGAAGCGAAGGAAGAATCCTTCGGATCAGAAGATCGAAACTGTTCAGATCTGAGTGATAACAGTTGTGGGATTAATGGAGAATTTGATATATCCAACACTCAAGATTCTGTTGAAGGGGTTAAGCATGAAACCGGTTCTTTTGGTGAGATCAGTAGAACCGAGGTGGATAGTTTGGAGGAGGAAATTTCAGTTTCAAGAGATTGTCAAAGTTCATCATTTAAGGGAGAGAACAAAGGACTGGATTACGGGTCACATAGTTCGGGACAGTTTCATCAACCCGTAGCAAATGTCTGCATTAAACAAGAAGAAAGTCTTAACATTGAAGCTGAAGATGTGAAGGAAATTTCACATGTTGTGTACAAGGAGAAAGAAAAGTATCCCCAAATTGAAGCAAACAGTGTAAAATTGGATCATCATCCAAAGGAACATAAGGTTACCAGCAAAGATAGGGAAAGCATTGGAGCCAAGACAAAGAAGAAATCAATGCTACCTACAGCTAAGGCATCCCAAATTTCCACACCAAGAAGTTCAAAGCCTACATCAACGCGAACCAAAACATTGACATCTGGTCCTTCAACTAGAAAGGGAGGTTCTCCATCTTTATCTAGAAGGCCAATTACTTCTGGTGTTGAAACCAGAAAAGTTGCTAACAAATCTTTGCACATGTCCCTGAGCTTGGGTCCAAGTAATCCTGGTCCAGCTCCTCATACTACAATGAGGAAATCTTCTATTATGGAGAAAGTGGGGGATAAGGACATAACAAGTAATCTTGATCCAGCTCCTCATACTACAGTGAGGAAATCTTCCATTATGGAGAAAATGGGGGATAAGGACATAGTCAGACGAGTATTTAAGACATTCCAAAATAATCCCGACCTTCCAAAAACTTATGCCGAAGACAGATCTCCGGTCAAAAAGCAGGTTCCTTTGAGGGGGACAGTGTCAAAAGTTCCAGCATCTACAGCTTTGCGGAAAGAAAATGGACGAATGACCCTCTTGAATAGGCCTACTAAGGTTGATAGTGTGGATAAAAGAAGTGGAAATTCTGTACGGACTACTATGGGACCAAAAAGTGATTTTAGAGCTGAGAAAGGAAAAGAGTCTTCAAGAAAAGTAGAGGAAACATCTAATGAAAAAGAGGTAGAAAGTACCCGCTTCCAATCAAAATTGAAGGAGGAAAAAGAGGCAGAGATGAAAAAGCTAAAACATAATTTCAAGGCCACACCCCTACCAGCTTTTTATGGGGGTCAAAAAGTATCAAAAAGTCACCCACAAAAGTTTTTTGGTCATTTGATGTTCCCTCACGTATTCGGGGGTAAGACTAATGCTCACTTGAGATACTTTGGTTGCCTCTCCCTACAAGTGCTTTCTCGCAGGGAGACGCCAAGACTGAGAACGGTCGATAGCCCCACAAGCGATGTAAGCAAGGAGAGATAG 1671 0.4135 MGETTGVSNSALQVSVSFGRFENESLSWEKWSSFCPNKYLEEVEKCATPGSVAQKKAYFEAHYKKIAARKAELLAQEKEAKEESFGSEDRNCSDLSDNSCGINGEFDISNTQDSVEGVKHETGSFGEISRTEVDSLEEEISVSRDCQSSSFKGENKGLDYGSHSSGQFHQPVANVCIKQEESLNIEAEDVKEISHVVYKEKEKYPQIEANSVKLDHHPKEHKVTSKDRESIGAKTKKKSMLPTAKASQISTPRSSKPTSTRTKTLTSGPSTRKGGSPSLSRRPITSGVETRKVANKSLHMSLSLGPSNPGPAPHTTMRKSSIMEKVGDKDITSNLDPAPHTTVRKSSIMEKMGDKDIVRRVFKTFQNNPDLPKTYAEDRSPVKKQVPLRGTVSKVPASTALRKENGRMTLLNRPTKVDSVDKRSGNSVRTTMGPKSDFRAEKGKESSRKVEETSNEKEVESTRFQSKLKEEKEAEMKKLKHNFKATPLPAFYGGQKVSKSHPQKFFGHLMFPHVFGGKTNAHLRYFGCLSLQVLSRRETPRLRTVDSPTSDVSKER 556
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g0571 556 Coils Coil 63 83 - -
Lal16g0571 556 PANTHER F3I6.9 PROTEIN 1 331 - -
Lal16g0571 556 PANTHER F3I6.9 PROTEIN 333 504 - -
Lal16g0571 556 MobiDBLite consensus disorder prediction 329 351 - -
Lal16g0571 556 MobiDBLite consensus disorder prediction 241 315 - -
Lal16g0571 556 MobiDBLite consensus disorder prediction 208 317 - -
Lal16g0571 556 MobiDBLite consensus disorder prediction 400 470 - -
Lal16g0571 556 Pfam Targeting protein for Xklp2 (TPX2) domain 435 501 IPR027329 -
Lal16g0571 556 MobiDBLite consensus disorder prediction 435 470 - -
Lal16g0571 556 PANTHER F3I6.9 PROTEIN 333 504 - -
Lal16g0571 556 PANTHER F3I6.9 PROTEIN 1 331 - -
Lal16g0571 556 MobiDBLite consensus disorder prediction 208 235 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal16g0571 Lal-Chr16 3678919 3683507 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal16g0571 - - gmx:100810690 545.043
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal16g0571 16 3678919 3683507 Lal16g0571 16 3678919 3683507 ECH
Lal16g0571 16 3678919 3683507 Lal15g0513 15 3541322 3546539 LSH
Lal16g0571 16 3678919 3683507 Lal23g1034 23 12129616 12134373 LSH