Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal23g1023 ATGAAGATAGCGAAGGTAGAACAATCTTCATTCATGCTACCCAATAGGCTCACACTACTTCAATTTTTCATGGCGGTGATGCTTCTCTACTTACTCTTCATGAGTTTCGAAATCCCTCTTGTTTTCAAAGCTTCTGTTTCCACTGAAAAAGGCACCACCTTTGGGTTCACATTACCCATGCCACTGTTACTAGAAGAAGAACCCGAAGAACAACCTTTTCGGGTACCCAATGGGTCAAAATTGCAGAAAGTTTCAACCTTGAGCTTCAACGAGAGCTTCAACATTGACAAAAATGGAGAATTTTCTGAACTTCATAAAGCGGCGAAACATGCATGGGTTGTGGGGAAGAAGCTATGGGAAGAAGTTGAAGCTGGTGAAGTTAAAGTTAGTAACTTTGCATCAAATTTTGAGAACGAGAATCAAAAGAAGAATAAAAACAGTTCTGATTCGTGCCCGAATTCGATTTCACTTTCAGGGTTTGAGTTCCGGGAGAATTTCAAAGGGTTGTTGGTTTTGCCTTGTGGATTGACCCTTTGGTCGCACGTGACAATTGTGGGTACCCCTCGTTGGGCTCACGCGGAGCGTGACCCGAAGATAGCGGTGCTGAGAGAAGGGGATGATGCTGTTATGGTGTCTCAGTTTATGATGGAGTTGCAAGGGTTGAAGGCCGTGGAAAATGAGGAACCACCTAGGATACTGCATTTTAATCCGAGGTTGAAGGGTGATTGGAGTGGTAAGCCAGTGATTGAGCAAAACACGTGTTATAGGATGCAGTGGGGCACAGCTCTTAGGTGTGAAGGGTGGAAGTCACGTGCTGATGAAGAAACTGTTGATGGACAGGTGAAATGTGAAAAATGGATTCGTGATGATGACAGCCGCTCAGAAGAGTGGAGGGCAACATGGTGGTTAAACAGACTGATAGGGCGTAAAAAGCAGGTGCCTATAGACTGGCCATATCCCTTCGTAGAGGAGAAACTATTTGTTATGACCGTAAGTGCTGGCTTGGAAGGTTACCATGTTAGTGTGGATGGGAGGCATGTGACATCCTTTCCCTATCGCACGGGCTTTGCTCTCGAGGATGCTACTGGACTATCTATAAATGGAGACGTTGATGTGCATTCTATTTTTGCTGCTTCCTTACCTGCATCACATCCTAGCTTTGCACCTCAGGTGCATCTTGAGTTGCTTCCACGATGGAAAGCTCCTCCTCTTCACAATGTGAACATCGAGCTTTTCATTGGTATCCTTTCTGCAGGCAACCATTTTGCTGAGCGGATGGCAGTTAGGAAGTCTTGGATGCAACATAAGCTTATCAAATCTTCACGTGTTGTGGCTCGGTTTTTTTTAGCCTTGCATGCAAGGAAGGATATAAATGTGGACATCAAGAAAGAAGCAGAGTATTTTGGAGATATTATTATAGTCCCGTACATGGATCATTATGACCTTGTTGTGTTGAAGACTATAGCTATCTGCGAATATGGGATTCGCTCAGTGGCTGCTAAATATATCATGAAGTGTGACGATGATACATTTGTCAGAGTGGATGCTATCATAAGCGAAGCAAGAAAAGTCCAAAGTGATAGAAGTCTCTACATCGGAAATATGAATTACCACCATTCTCCCCTTCGCCATGGCAAGTGGGCTGTAACATATGAGGAATGGGTAGAAGAAGAATATCCTACATATGCTAATGGTCCAGGTTACATAGTCTCATCTGACATTGCTCGTTTCATTGTATCCGATTTTGAGAAGCACATATTAAAATTGTTTAAAATGGAAGATGTGAGCATGGGAATGTGGGTAGAGCAGTTCAACAGCACAAGACCAGTAGAGTATGTGCACAGCTTGAAGTTTTGTCAATTTGGGTGCATCGATGATTACTACACTGCACATTACCAATCACCCCGACAAATGACATGCATGTGGGATAAATTGCAAATTCAGGGAAAACCTCTCTGTTGCAACATGAGATGA 1974 0.4347 MKIAKVEQSSFMLPNRLTLLQFFMAVMLLYLLFMSFEIPLVFKASVSTEKGTTFGFTLPMPLLLEEEPEEQPFRVPNGSKLQKVSTLSFNESFNIDKNGEFSELHKAAKHAWVVGKKLWEEVEAGEVKVSNFASNFENENQKKNKNSSDSCPNSISLSGFEFRENFKGLLVLPCGLTLWSHVTIVGTPRWAHAERDPKIAVLREGDDAVMVSQFMMELQGLKAVENEEPPRILHFNPRLKGDWSGKPVIEQNTCYRMQWGTALRCEGWKSRADEETVDGQVKCEKWIRDDDSRSEEWRATWWLNRLIGRKKQVPIDWPYPFVEEKLFVMTVSAGLEGYHVSVDGRHVTSFPYRTGFALEDATGLSINGDVDVHSIFAASLPASHPSFAPQVHLELLPRWKAPPLHNVNIELFIGILSAGNHFAERMAVRKSWMQHKLIKSSRVVARFFLALHARKDINVDIKKEAEYFGDIIIVPYMDHYDLVVLKTIAICEYGIRSVAAKYIMKCDDDTFVRVDAIISEARKVQSDRSLYIGNMNYHHSPLRHGKWAVTYEEWVEEEYPTYANGPGYIVSSDIARFIVSDFEKHILKLFKMEDVSMGMWVEQFNSTRPVEYVHSLKFCQFGCIDDYYTAHYQSPRQMTCMWDKLQIQGKPLCCNMR 657
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal23g1023 657 Pfam Galactosyltransferase 424 604 IPR002659 GO:0006486|GO:0016020|GO:0016758
Lal23g1023 657 SMART Gal_bind_lectin_2 172 377 IPR001079 GO:0030246
Lal23g1023 657 Gene3D - 165 376 - -
Lal23g1023 657 ProSiteProfiles Galactoside-binding lectin (galectin) domain profile. 168 378 IPR001079 GO:0030246
Lal23g1023 657 SUPERFAMILY Concanavalin A-like lectins/glucanases 171 376 IPR013320 -
Lal23g1023 657 Gene3D - 404 643 - -
Lal23g1023 657 PANTHER BETA-1,3-GALACTOSYLTRANSFERASE-LIKE PROTEIN 11 657 - -
Lal23g1023 657 Pfam Galactoside-binding lectin 170 376 IPR001079 GO:0030246
Lal23g1023 657 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 11 657 IPR002659 GO:0006486|GO:0016020|GO:0016758
Lal23g1023 657 CDD GLECT 172 376 IPR001079 GO:0030246
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal23g1023 Lal-Chr23 12041804 12045948 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal23g1023 2 657 Glycosyltransferase AT1G74800 61.437 0.0 854
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal23g1023 K20843 - gmx:100803219 1072
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal23g1023 23 12041804 12045948 Lal23g1023 23 12041804 12045948 ECH
Lal16g0587 16 3811017 3815361 Lal23g1023 23 12041804 12045948 LSH