Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g0587 ATGAAGAGGTCAAAGTCAGAACAATCTTCATTCATGCTTCCCAACAGACTCACTCTCATTCAATTTTTCATGGCGGTGATGCTTCTCTACTTGCTATTCACTACTTTCGAAATTCATATTGCTTCCAAAGCAGGGTTATCCTCTGTTTCCACTGAAAAAGGCACCACCTCTGGGTTCAGATTATCCACGCCACTGTTACTAGAAAAAGAACCCGCGGAACCATTTGCAATTCGACCCAAATATAAACCTTTTCGGGTACCCAATAGGTCAAAATTGCAGAAAGTTTCAACCTTGAGGTTCAACGAGAGTTTCACCATTATCAAAAATGGAGAATTTTCTAAACTGCATAAAGCGGCGAAGCATGCATGGGTTGCGGGGAAGAAGCTATGGCAAGAAGTTGAAGTTACTAACTTTGAAGCAAAGTTCAAGAATGAGAATCAGAAGAAGAATAAAAAAAACGATTCTGATTCGTGTCCTAATTCGGTTTCAATTTCCGGGTTAGAGTTTCGTGACAAGTTTAAAAGGGTAATGGCGTTACCTTGTGGATTGACCCTTTGGTCGCACGTGACAGTTGTTGGTACCCCTCGTCGTGCTCACGCTGAGCGTGACCCGAAGATAGCGTTGCTGGGGGAAGGTGATGAAGCTATTATGGTTTCACAGTTTATGATGGATTTGCAAGGATTGAAGACCGTGGAGAATGAAGAGCCTCCGAGGATACTGCATTTGAATCCGAGGTTGAAAGGGGATTGGAGTGGGAAGCCAGTGATTGAACATAACACGTGTTATAGGATGCAATGGGGTTCTGCTTATAGGTGTGAAGGGTGGAAGTCACCTCCTGATGAGGAAACTGTTGATGGGCAGGTGAAATGTGAAAACTGGATTCTTGATGATAACAGCCGCTCAGAAGAGTTGAAGGCAACATGGTGGTTAAACAGACTGATAGGGCGAAAAAAGCATGTGCCTCTAGACTGGCCATATCCTTTTGCAGAGGGGAAACTATTTGTCATGTCCTTAAGTGCTGGCTTGGAAGGTTACCATGTTAGTGTGGATGGGAGGCATGTCGCATCCTTTCCCTATCGAACGGGCTTTGCTCTTGAAGATGCTACTGGACTATCTATAAACGGAGACGTTGATGTGCATTCTATATTTGCTGCTTCCTTACCTGCATCACATCCCAGCTATGCTCCACAGTTGCATCTTGAATTGCTTCCACAATGGAAAGCTCCTCCTCTTCGCAATTTGACTGTGGAGCTTTTCATAGGTATACTTTCTGCTGGCAACCATTTTGCTGAGCGGATGGCAGTTAGGAAGTCATGGATGCAACACGAGCTAATCAAATCTTCACATGTTGTAGCTCGTTTTTTTGTAGCCGTGCATGCAAGGAAGGACATAAACGTGGACATCAAGAAAGAAGCAGAGTATTTTGGCGATATTATTATAGTCCCATACATGGACCACTATGACCTTGTTGTGTTGAAGACCATCGCTATCTGTGAATATGGGATTCGCACACTGCATGCTAAGTACATCATGAAAGGTGATGATGACACATTTGTCAGGGTGGATTCTATCATAAGCGAAGCAAGAAAGGCAGAAAGTGATAGAAGTCTCTACATGGGCAATATGAATTACCACCATACTCCACTTCGCAGTGGCAAATGGGCTGTAACATATGAGGAATGGGTAGAGGCAGAGTATCCTACCTATGCTAATGGTCCAGGTTACATAATCTCATCTGACATTGCTCAGTTCGTTGTATCTGAATTTGAGAAGAGCAGATTAAACTTATTTAAAATGGAAGATGTGAGCATGGGAATGTGGATAGATCAGATCAACAAAAGAAGGGCAGTAAAGTACGTGCACAGCTTGAATTTCTGTCAATTTGGGTGCATTGATGATTACTACACTGCACATTACCAATCCCCGCGACAAATGACATGTTTGTGGGATAAGTTGCAACAGCAGGGAAAACCATTATGTTGCAACATATGA 1992 0.4317 MKRSKSEQSSFMLPNRLTLIQFFMAVMLLYLLFTTFEIHIASKAGLSSVSTEKGTTSGFRLSTPLLLEKEPAEPFAIRPKYKPFRVPNRSKLQKVSTLRFNESFTIIKNGEFSKLHKAAKHAWVAGKKLWQEVEVTNFEAKFKNENQKKNKKNDSDSCPNSVSISGLEFRDKFKRVMALPCGLTLWSHVTVVGTPRRAHAERDPKIALLGEGDEAIMVSQFMMDLQGLKTVENEEPPRILHLNPRLKGDWSGKPVIEHNTCYRMQWGSAYRCEGWKSPPDEETVDGQVKCENWILDDNSRSEELKATWWLNRLIGRKKHVPLDWPYPFAEGKLFVMSLSAGLEGYHVSVDGRHVASFPYRTGFALEDATGLSINGDVDVHSIFAASLPASHPSYAPQLHLELLPQWKAPPLRNLTVELFIGILSAGNHFAERMAVRKSWMQHELIKSSHVVARFFVAVHARKDINVDIKKEAEYFGDIIIVPYMDHYDLVVLKTIAICEYGIRTLHAKYIMKGDDDTFVRVDSIISEARKAESDRSLYMGNMNYHHTPLRSGKWAVTYEEWVEAEYPTYANGPGYIISSDIAQFVVSEFEKSRLNLFKMEDVSMGMWIDQINKRRAVKYVHSLNFCQFGCIDDYYTAHYQSPRQMTCLWDKLQQQGKPLCCNI 663
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g0587 663 SMART Gal_bind_lectin_2 179 384 IPR001079 GO:0030246
Lal16g0587 663 CDD GLECT 178 383 IPR001079 GO:0030246
Lal16g0587 663 Gene3D - 169 383 - -
Lal16g0587 663 PANTHER BETA-1,3-GALACTOSYLTRANSFERASE-LIKE PROTEIN 11 662 - -
Lal16g0587 663 Pfam Galactosyltransferase 431 611 IPR002659 GO:0006486|GO:0016020|GO:0016758
Lal16g0587 663 Gene3D - 413 648 - -
Lal16g0587 663 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 11 662 IPR002659 GO:0006486|GO:0016020|GO:0016758
Lal16g0587 663 SUPERFAMILY Concanavalin A-like lectins/glucanases 177 383 IPR013320 -
Lal16g0587 663 Pfam Galactoside-binding lectin 175 383 IPR001079 GO:0030246
Lal16g0587 663 ProSiteProfiles Galactoside-binding lectin (galectin) domain profile. 175 385 IPR001079 GO:0030246
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal16g0587 Lal-Chr16 3811017 3815361 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal16g0587 20 663 Glycosyltransferase AT1G74800 58.673 0.0 801
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal16g0587 K20843 - gmx:100803219 1002.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal16g0587 16 3811017 3815361 Lal16g0587 16 3811017 3815361 ECH
Lal16g0587 16 3811017 3815361 Lal23g1023 23 12041804 12045948 LSH