Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal23g1019 ATGGAGTTTTTCACCAAAACAAAAACCGTCAAGCTCCACACCCACTTCGGCAAATACCTCATCGCCGATAACGACTGCGAAACAGTTAACCAGAGCCGTAACGGCTCAACCAGAAGAGCCAAATGGAGGGTCGAACCAGTCGAAGACGTAATCAACAACACCCAACGTGTGCGCCTCAAAAGCTGCCACGGAAAATACTTAACCGCGATGGAAACGCCGTTTCTTCTAGGCATGAACGGGAACCAGATTCTCCAAACAGTTTTCAATTCAAATTCTGAATACAAATTCGATTGGGAACCGGTTCGAGACGGTTTTCAGGTGAAGCTTCGAAGCTGGTGTGGGAAGTATTTGAGAGCGAACAAAGCAACACCGCCGTGGAGAAATTCTGTTACTCACGATGGTCCGTTTAACGCAGCGACACAGAATTGTTTTCTGTGGGATGTTCAAAGTGTAGAGTTGGAAGATGAGAATGAGTCATTGTTCTCCGAGAGTGCTGTTGTTTCATCTTCTGCTTATTCTCGTTATCTTTTCGATTTGCTGCCATTTTCATCCATGTCCATTTTCTCTCGCAACTTTAAGACACAAAGTTCCAACAAGTTCAAAACAGCTATGGAATTCTTCCACCATGCAAAGGCCGTGCGCTTCCGCAGCAACCACCACAAGTACCTCCTCGCGGAGGAGGACCAGGATTCTGTCTCACAACACAGAAACGGTTCATCCAAGAATGCAGAGTGGATAATTGAACATGTCCCTCACTACGACAACATCATTCGCCTCAAAAGCTGTTATGGAAAGTACCTCACTGCCTCCAACCACCCCTTTTTGCTAGGCATGACCGGCAGAAAGGTGCTTCAAACACTTCCTCACAGGCTTGACTCTTCGGTTGAATGGGAACCCGTAAAATATGGGGCACTTGTGAAGCTTAGAACACGTTATGGTAATTTTCTTAGAGCGAATAATGGATTGCCTCCATGGAGGAATTCAGTGACGCATGATATTCCGAATAGGGCTGCTACCCAGGATTGGATATTGTGGGATGTTGATGTTGTGGAGATAAATGTTCATCATTCCGTTCAGAGTTTGTCTTATTATCCTTCCTTGGCAAAGGAGGATTCTCGTAGGTTTGAAAATAATGTGCCATCATCCCCTGTTTTCACTACCAAATCTCCTAGCCTTTTGAGCCAACAGTCAACTGATTCCAAAGGTGGCTCATCGCAAAAGATAGAGGGGCGAACTATATACTATCATGTTGCTGAAGACAATGAAGAGGTGAGTGATGAAGATATGCCTGAAAATTCTTTGATTTTCAATGGGAATGAAGTTGAAGAATTGACTTGTATGCTTGAGGAAGAGACAGGGTTAGAAGGGATCATTGTGTGTTCTCGGAGTCCTTTAAATAGAAAGCTTTACCCTCTTCGCTTGCAGCTTCCTCCAAACAATATCACTATGCAGGTTGTCTTGATTCTTCCTTTCTCCAAAGTGGCTAGAGACTTTGAGGAACAAGGTTTACTGTGA 1515 0.4449 MEFFTKTKTVKLHTHFGKYLIADNDCETVNQSRNGSTRRAKWRVEPVEDVINNTQRVRLKSCHGKYLTAMETPFLLGMNGNQILQTVFNSNSEYKFDWEPVRDGFQVKLRSWCGKYLRANKATPPWRNSVTHDGPFNAATQNCFLWDVQSVELEDENESLFSESAVVSSSAYSRYLFDLLPFSSMSIFSRNFKTQSSNKFKTAMEFFHHAKAVRFRSNHHKYLLAEEDQDSVSQHRNGSSKNAEWIIEHVPHYDNIIRLKSCYGKYLTASNHPFLLGMTGRKVLQTLPHRLDSSVEWEPVKYGALVKLRTRYGNFLRANNGLPPWRNSVTHDIPNRAATQDWILWDVDVVEINVHHSVQSLSYYPSLAKEDSRRFENNVPSSPVFTTKSPSLLSQQSTDSKGGSSQKIEGRTIYYHVAEDNEEVSDEDMPENSLIFNGNEVEELTCMLEEETGLEGIIVCSRSPLNRKLYPLRLQLPPNNITMQVVLILPFSKVARDFEEQGLL 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal23g1019 504 PANTHER ACTIN CROSS-LINKING PROTEIN (DUF569) 193 492 - -
Lal23g1019 504 PANTHER ACTIN CROSS-LINKING PROTEIN (DUF569) 1 163 - -
Lal23g1019 504 MobiDBLite consensus disorder prediction 377 407 - -
Lal23g1019 504 Gene3D - 5 130 - -
Lal23g1019 504 Pfam Domain of unknown function (DUF569) 1 146 IPR007679 -
Lal23g1019 504 Pfam Domain of unknown function (DUF569) 204 345 IPR007679 -
Lal23g1019 504 SUPERFAMILY Actin-crosslinking proteins 207 349 IPR008999 -
Lal23g1019 504 SUPERFAMILY Actin-crosslinking proteins 7 135 IPR008999 -
Lal23g1019 504 Gene3D - 212 350 - -
Lal23g1019 504 MobiDBLite consensus disorder prediction 375 407 - -
Lal23g1019 504 PANTHER CROSS-LINKING PROTEIN, PUTATIVE (DUF569)-RELATED 1 163 - -
Lal23g1019 504 PANTHER CROSS-LINKING PROTEIN, PUTATIVE (DUF569)-RELATED 193 492 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal23g1019 Lal-Chr23 12018599 12023927 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal23g1019 - - lang:109349261 689.108
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal23g1019 23 12018599 12023927 Lal23g1019 23 12018599 12023927 ECH
Lal16g0592 16 3827058 3833659 Lal23g1019 23 12018599 12023927 LSH
Lal15g0527 15 3664645 3672561 Lal23g1019 23 12018599 12023927 LSH