Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g0592 ATGGAGTTTTTCGTCAAAGCTAAAACCATCAAACTCCACAGTCACCTCGACAAGTACCTCATCGCAGACGACGATCGTGAAACGGTTCGTCAGAGCCGGAATAGCTCAAACTTAAGAGCCAAATGGACTGTTGAAATCGCTGAAGACGGCGTAAACAACAACCACCGCGTGCGGTTGAAAAGCTGCCACGGAAAATACTTAACGGCAACGGAAACGCCATTTCTTTTAGGCATGACCGGAAACCGTGTTCTCCAAACAAACATTGAACCAGGTTTAGAATGGAAATTCGATTGGGAACCGGTTCGAGACGGTTTTAACGTGAAGCTTCGTAGTTGGAGCGGGAAGTATTTGAGAGCGAATGGAGGAACACCGCCGTGGAGAAATTCCGTTACCCACGATGATCCGTCTAGTTCAGCGACACAGGATTGGGTTCTGTGGGAGGTTCGAAGTGTGGAGTTGAAAGAGGAAGAGGAAGAGAAAGAGGTGTTGTTATCGGAGAGTGTTGTTCCTTCTTTTCCTTATTTTGATTCCGAAGCAGTGTCACCCATGTCACTTTTCTCCACGGAGTCGTTGCCTTCCACAAAACGCAACTTCAAGACACCAGGTATGGACTTCTTCCACCATGCCAAGACTGTGCGCCTCCGCGGCCACCACGTAAAGTATCTCATCGCGGAGGAGGACGAGGAATCTGTCACCCAAAACCGCAACGGTTCCTCCAAGAATGCACGGTGGACATTGGAATACGTCCCTCACAACAACAACATCATTCGCCTCAAAAGTTGTTACGGAAAGTACCTCACAGCATCAAACTACCCTTTTTTGCTGGGCATGACGGGTCACAAGGTGCTTCAAACACTTCCTCATATACCCGACTCTTCGTTGGAGTGGGAACCGATAAAAGATGGGGCACGCGTGAAGCTTAGAACATGTGATGGTAATTTTCTTAGAGCAAATGGAGGATTGCCACCTTGGAGAAATACCATAACACATGATATTCCTCATAGGACTGCAACACAGGATTGGATATTGTGGGATGTTGATGTTGTGGAGATAAATGTTAACTCTCCCGTTCATGAATTACCTTCTCCTCCACCCTTGCTGAAACAAGATTCAAATGGGTTTCAAAACAGTGTTCCATCTTCACCTCTTGTGCATGATAAATCTCCCAGCTTTTTCAGGCAGCAGTCAAATGATTCGAAAGTTGATACATTGCCAAAGATGGAGGGGCGAGTTATATACTATCATGTTGCTGATGAGAGTGGAGAAGTGAGTGATGAAGGTATGCCAATGATTTTCAAAGGGTATGGAGTTGAAGAATTGACTCATAAGTTTGAAGAAGAGACAGGGTTAGAAGGAATCATTGTATGTAATAAGAGTCCTTTGAATGGAAAGCTTTACCCTCTTCGATTGCAGCTTCCTCCACACAATGTCACTATGCATGTTGTCTTGGTTCTTCCTTTCTCCAAAGTGGCTATGGACTTTGAGGCACAAGGTTTACTATGA 1503 0.4551 MEFFVKAKTIKLHSHLDKYLIADDDRETVRQSRNSSNLRAKWTVEIAEDGVNNNHRVRLKSCHGKYLTATETPFLLGMTGNRVLQTNIEPGLEWKFDWEPVRDGFNVKLRSWSGKYLRANGGTPPWRNSVTHDDPSSSATQDWVLWEVRSVELKEEEEEKEVLLSESVVPSFPYFDSEAVSPMSLFSTESLPSTKRNFKTPGMDFFHHAKTVRLRGHHVKYLIAEEDEESVTQNRNGSSKNARWTLEYVPHNNNIIRLKSCYGKYLTASNYPFLLGMTGHKVLQTLPHIPDSSLEWEPIKDGARVKLRTCDGNFLRANGGLPPWRNTITHDIPHRTATQDWILWDVDVVEINVNSPVHELPSPPPLLKQDSNGFQNSVPSSPLVHDKSPSFFRQQSNDSKVDTLPKMEGRVIYYHVADESGEVSDEGMPMIFKGYGVEELTHKFEEETGLEGIIVCNKSPLNGKLYPLRLQLPPHNVTMHVVLVLPFSKVAMDFEAQGLL 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g0592 500 PANTHER CROSS-LINKING PROTEIN, PUTATIVE (DUF569)-RELATED 195 489 - -
Lal16g0592 500 PANTHER CROSS-LINKING PROTEIN, PUTATIVE (DUF569)-RELATED 1 161 - -
Lal16g0592 500 SUPERFAMILY Actin-crosslinking proteins 206 349 IPR008999 -
Lal16g0592 500 Pfam Domain of unknown function (DUF569) 1 146 IPR007679 -
Lal16g0592 500 Pfam Domain of unknown function (DUF569) 203 344 IPR007679 -
Lal16g0592 500 Gene3D - 206 346 - -
Lal16g0592 500 Gene3D - 5 159 - -
Lal16g0592 500 SUPERFAMILY Actin-crosslinking proteins 5 150 IPR008999 -
Lal16g0592 500 MobiDBLite consensus disorder prediction 360 398 - -
Lal16g0592 500 MobiDBLite consensus disorder prediction 368 398 - -
Lal16g0592 500 PANTHER ACTIN CROSS-LINKING PROTEIN (DUF569) 195 489 - -
Lal16g0592 500 PANTHER ACTIN CROSS-LINKING PROTEIN (DUF569) 1 161 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal16g0592 Lal-Chr16 3827058 3833659 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal16g0592 - - lang:109349261 895.19
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal16g0592 16 3827058 3833659 Lal16g0592 16 3827058 3833659 ECH
Lal16g0592 16 3827058 3833659 Lal15g0527 15 3664645 3672561 LSH
Lal16g0592 16 3827058 3833659 Lal23g1019 23 12018599 12023927 LSH