Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal23g0796 ATGGTTTCAATTATAGCTCCTTCTTCTCTGTATTCATCATCACCTTTCACCCTCTTTAATTCCCACAAGCTTTCTTCATCCAAAAACTTCTCTAAACAAACTCAGGCATTTCTTCTCAGCAGCCATAGAAACTTGTCTTTGCCATACCATTTCACTTCAACTTCCAAAAGGGGTCTTCCTTCAGTTTGCTTCTTCAACAAACCTGATACCAAGTTTCAGGACAAGGAATCTGGACAAGAATGGCGTATTCTTAGGCGCTGGGAGGTCCCTTGGCCGTGGCAAACAGTTTCATTAACCTCTCTTGCGTGTGGATTGGGTTTTGTGTTGGCAGGTTTGGTTGAGGCAACGGTTATACCATATCTAGGGATTCGACCTGATCAGCTAAGTTTAGATGAGAAGGCAGAATTACTTTTTCTAGATCAAGGCATCACAACTGCTGTTGTACTTGGAGTTATATTTGCTACTGCCAACACTTTCCAGCCACTCCCTGAAGACTTCTTCAAATATGATTTGAGGGAACCTTTCAATCTTCAAAAGGGGTGGCTTTTGTGGGCAGGAATTGGACTTGTTGGTGCCCTAATTGCCATTTCACTGACAGGAGTTGCTGTGTCCTTCTTCAATGGAGAAGCCCCACAAAGAGAGACTGATGCTCTTGTTAGCTTGCTTCCATTAATTGGGTCTTCAAGTGTCAGCACTGCTTGCTTGGTAGGCATCACAGGCGTTCTTGCTCCGCTTCTTGAGGAGACTGTTTTTAGAGGCTTTTTCATGACTTCCCTGACTAAGTGGGTTCCTACACCAGTTGCTGTCATCATTAGTGCTGCTGTGTTTGCTCTTGCCCATTTCACTCCTGGAGAATTTCCACAGTTGTTCGTTCTAGGGGCTGCTTTGGGGATTTCTTATGCTCAAACTCATAACCTTCTCACTCCTATCACCATCCATGCTTTGTGGAACTCAGGAGTTATATTATTTCTCACTTTTCTTCAGCTTCAAGGATATGATATCAAAGAAGTATTGCAGACTGTTTGA 1026 0.4337 MVSIIAPSSLYSSSPFTLFNSHKLSSSKNFSKQTQAFLLSSHRNLSLPYHFTSTSKRGLPSVCFFNKPDTKFQDKESGQEWRILRRWEVPWPWQTVSLTSLACGLGFVLAGLVEATVIPYLGIRPDQLSLDEKAELLFLDQGITTAVVLGVIFATANTFQPLPEDFFKYDLREPFNLQKGWLLWAGIGLVGALIAISLTGVAVSFFNGEAPQRETDALVSLLPLIGSSSVSTACLVGITGVLAPLLEETVFRGFFMTSLTKWVPTPVAVIISAAVFALAHFTPGEFPQLFVLGAALGISYAQTHNLLTPITIHALWNSGVILFLTFLQLQGYDIKEVLQTV 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal23g0796 341 PANTHER CAAX AMINO TERMINAL PROTEASE 24 330 - -
Lal23g0796 341 PANTHER CAAX AMINO TERMINAL PROTEASE FAMILY PROTEIN 24 330 - -
Lal23g0796 341 Pfam Type II CAAX prenyl endopeptidase Rce1-like 235 317 IPR003675 GO:0004222|GO:0016020|GO:0071586
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal23g0796 Lal-Chr23 10461874 10468737 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal23g0796 K07052 - gmx:100816434 526.554
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal23g0796 23 10461874 10468737 Lal23g0796 23 10461874 10468737 ECH
Lal16g0835 16 5396522 5400848 Lal23g0796 23 10461874 10468737 LSH