Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g0835 ATGGTTTCAATTATAGTTCCTTCTTCTCTGTATTCATCATCGTCATCATTTTGCACCCTCTTCCATTCCCACAACCTTTCTTCTTCACCCAAAACCTTCTCTAAACAAAGTCGTGCATTTCTTCTCACTACTCATAAAAATTTGTCTTTGCCGTACCATTTCACTTCGATTTCCAAAAGGGGTCTTTCTTCACTTTGCTTCTTTAACTCTGGAGACAAACCTGACACCAAGTTTCACGACAAGGAATGGCCTATTCTTAGGCGATGGGAGGTCCCTTGGCCATGGCAAACAGTTCCATTAACCTCCCTCGCGTGTGGATTGGGTTTTGTGTTGACAGGTTTGGTTGCGGCAACAGCCGTACCATATCTAGGGATTCAACCTGATCAGCTAAGTTTAGATGAGAAGGCAGAATTACTTTTTGTAAATCAGGGCATCACAACTGCTGTTGTACTTGGAATTATATTTGCTACTGCCAACACTTTCCAGCCACTCCCTGAAGACGTCTTCAAATATGATTTGAGGGAACCTTTCAATCTTCAAAAGGGGTGGCTTTTGTGGGCAGGAATTGGACTTGCTGGTGCCCTATTTGCCATTGCATTGACAGGAGTTGCTTTGTCCTTCTTCAATGGAGAAGCCCCACAAAGAGAGACTGATGCTCTTGTTCGCTTGCTTCCATTAATTGGGTCTTCAAGTGTCAGCACTGCTTGCTTGGTAGGCATCACAGGCGTTCTTGCTCCACTTCTTGAGGAGACAGTGTTTCGAGGCTTTTTCATGACTTCCCTGACTAAGTGGGTTCCTACACCAGTTGCTGTCATCATTAGTGCTGCTGTGTTTGCCCTTGCCCATTTAACTCCTGGAGAATTTCCACAGTTGTTCGTTCTAGGGGCTGCTTTGGGGATTTCTTATGCTCAAACTCACAACCTTCTCACTCCCATCACCATCCATGCTTTCTGGAACTCAGGAATTATATTATTTCTTACTTTTCTTCAGCTTCAAGGATACGATATCAAAGAATTATTGCAGACTGTTTGA 1032 0.437 MVSIIVPSSLYSSSSSFCTLFHSHNLSSSPKTFSKQSRAFLLTTHKNLSLPYHFTSISKRGLSSLCFFNSGDKPDTKFHDKEWPILRRWEVPWPWQTVPLTSLACGLGFVLTGLVAATAVPYLGIQPDQLSLDEKAELLFVNQGITTAVVLGIIFATANTFQPLPEDVFKYDLREPFNLQKGWLLWAGIGLAGALFAIALTGVALSFFNGEAPQRETDALVRLLPLIGSSSVSTACLVGITGVLAPLLEETVFRGFFMTSLTKWVPTPVAVIISAAVFALAHLTPGEFPQLFVLGAALGISYAQTHNLLTPITIHAFWNSGIILFLTFLQLQGYDIKELLQTV 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g0835 343 Pfam Type II CAAX prenyl endopeptidase Rce1-like 237 319 IPR003675 GO:0004222|GO:0016020|GO:0071586
Lal16g0835 343 PANTHER CAAX AMINO TERMINAL PROTEASE FAMILY PROTEIN 21 332 - -
Lal16g0835 343 PANTHER CAAX AMINO TERMINAL PROTEASE 21 332 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal16g0835 Lal-Chr16 5396522 5400848 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal16g0835 K07052 - gmx:100816434 488.419
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal16g0835 16 5396522 5400848 Lal16g0835 16 5396522 5400848 ECH
Lal16g0835 16 5396522 5400848 Lal23g0796 23 10461874 10468737 LSH