Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal23g0704 ATGGCGATCGTAACCGGAGATCGCTACCTCGATAAACTCGTCAAGTTCGTTGACGAACAAGCAGGTCTTCTCATCGACGGAGTCTTAGTTCTGAAGCTAAATCCGGCGGGACTTCACTACATGCAATCTAGACTCGAAGCTTTATACGAACTCGAGAGTTTACTAACCGGAGCTCCGGTCGATTATCTCCGAGCCTATGTTTCTGACCTCGGCGACCACCGCGCTCTCGAGCAGCTCCGGAGGATCCTCCGTCTTCTTACGTCGCTGAAAGTTGTTTCGGTGTTGCCGCCGCAGATCAGGGACCCTACGCCATTGTCGTTTTTACCGTTTGGGAGGTTGAAAGTTTTGGAGCTTAGAGGATGTGATTTGTCCACTTCCGCTGCGAGAGGATTGCTTGAGCTTAGGCACACTCTTGAGAAGATTGTTTGTCATAATTCTACTGATGCTCTGCGGCATGTATTTGCAAGCAGGATAACAGAGATAAAGGACTCTCCACAATGGAACCGGTTGTCATTTGTCTCCTGCGCATGTAATGGGTTAGTTCTCATGGATGAGTCTTTGCAGCTTCTTCCCGCTGTTGAAACACTTGACCTTAGCAGGAACAAGTTTGCAAAGGTGGATAATCTGAATAAGTGCATGAAATTGAAGCATTTGGATCTTGGTTTCAATCACCTCAGAACACTTGCACCATTCAGCCAGGTTTCCTATCATATTGTTAAACTAGTTTTGAGGAACAATGCTCTATCTACTTTGCGTGGGATTGAGAACTTGAAGTCACTAGAAGGACTTGATGTTTCCTACAATATTATTTCCAATTTTTCAGAGCTTGAGTTCCTTGCAAGCCTTACAAATCTCCAAGCCTTGTGGTTGGAAGGAAATCCTTTGTGCTGTGCTCGATGGTATAGAGCACAAGTGTTCAGCTTCTTTTCCTGCCCAGAAAAGGCAAGTTCAATTGTCTTCATCCTATGTATCTGTTTAGTATTGAAGTTAGATGCGAAGGAAATTAGCACTATAGATTTTTGGAAGAGACAAATAATTATTGCCAGTATGCAAAAGCAGCCCACCAGTTTTGGGATTTATGTGCCTGCAAAGGATGAGGCTATAGTGGAAGGGAGCAATGAGAGAAGGAGACCTCGTCTTGCCTGCATTGAGAGTGAAGAAGGGATCACTAGCATATGTTCTGATGAGGAGCCTGTATCATGTACAAATGATATTCAAAACAGAGAGGACCATGATTTATCTAATGAGGAAGCTGAAGTAGAGGGTTTGATAAATAAAATTGAACAAATGAAGAAAGAGCGTTCTATTCTTTGGTTGCGGGAATTTAAAGACTGGATGGATATCACCTCTGATAAATCAGTGGTAACTAACGAAGAAGACAGAGCTGCATTGCATCATCTGAAAGAAAATTACATCAGAAATGAGACAAATCAGGAGCAACATGGTGAAGTCTCAAGATATGTTTCAGATTCTGTTCTAGCCTCTGGAGATGACAGTAGTATGAATATTTTAGAACCGGACAGTTCTTTTGTAGACATGTCTGCTAGTTCTCATAGACAGCAGAACTTTGACCATAGAGTTTTGTTAGGTAATGCTGGTGGGGCCTCTCATTCTGACTCTGGAGGAGCAGATGTTGGGCATCTTAAACCTTTGTCACTTGAGGGAATTAGTAGTTCACCCTCACATTTTAAAAGTTATCATTCTGACACCAGTGCCATCCATGGAGCACATGGAATGGCTGGAAATATGGATATATCACCATTGACCACAGTTTGTGATATATTTGGGTCTCAGTCATCATCTGCATGCCCTACATCTCCTCCTCATTTTCAAAAAGACCTTTTTCATCGTCGGCAACACCTAGTGGAGGAAGTTTTGCAGCTGTCTGCAGGTTCCTTTTCAATGGCATCTTCTGATAGTAACACCAGCTGTAGTGAAGTTGATTACACTGAGTTTGAGTCATCAGTGCCTGAAGTTGATAATTTCCCATGCAAAAATTATGTAAATGGGAGTGTTCATGGTCATATATCTCAAAATCACCTCAAGGACAAGTTCAATAACCCAAGCCAAGGAGTTCTTCATGCAATAGAAAATGGCTTATGTTTATTTAGTTCAACCACTGACCAAACTTCTCGGCATGCTTCATTTGATGTTGCTGCTGCTGCTGACAATGGTCAGAGAGCATTTTTTGTTAGCCAAGATGCTGATTTCATGAAGAAAAGAAAAAGAAAAATAAAAGCCAAGAAGAGAGTTATTTCAATCTTAGAAGAGAATCCAGACTGCAATGCATGTGATCATGAACGTGAGCAGATTAGTCAAGGAGAGATTTCCATAGATTCCAAGAGAGAATTGGGCGTTGATGAATTTCCTGAGGGGAATCATTCTACCCAAGAGAATGATGATTTTATCGTTACGTATTTTAATATGTATATTGCTGATTTTGAAGCCAGTGAAATCTGTAGTCATTGCATACGCTGTAATTTTGTCCTTCAGAGGGAAATGATCTATAAAGAAAGAGAAGTTGCAGTATTGCTGAGCAGCCACAAGAAGCTCTATGTGCTACTAATCAATGTTGATTCAGATGGGTCAGGAAATCTTTTGAGTTTATTGAATTGCCACAAGTTGGAAGAAGTTTGTGAGGTGCTTGTTGGAATGGGACTTCAGGTGTTAAGGGTGAATTTTGAGAGTGGTGAAGCATACCTTTTTGTAACTAAAAGCATTGAGAAATCAAGAGAGATACTGTGTACTATACTCATGTTTGATTCATGTGGTGGAGATGATAGATTCTCAATAAGAAGTTTGGAGCAGGTCCAGGTTGAGCTGTTTGACAACCAAATATGTGGTGGTTCAAATGTGAGCATATATCAGTACGCAATGGTGCTCGTCTGTTATAACAATGGTAGTGATCAACCATGGTTCTCAAGATCGCTGTTTGTGATTGGAGGGTATGTGCTTTTATGCATCGAAGATGTTAAGCAACTGTACTCATTTTCAACAGACGCGTCTGTTTCTCCATACTTCAGACTTGATTCATGTTGCTCCATTGCTGACATTACTGAGATGGTCACCGAGGTTCGCGACAACAGCTGCTGTGTGACATTAACTATCAGAAATCTGATGCCAGAATTCCACCCGTCAACCCGAACAAACCTTGAACCTGTCAATCATGGTAACACAGCTCCAGGCTCTATCAAATTGAAAATTCAGTGGTACTCGAAGGATAACCTTTTGAAGTTCGTGTCATTGATGAAGGCAATCCATGCAGAAAAGCCGGTGTCCCCTTTGGTAGTAAGATGTATATCGTAA 3306 0.4159 MAIVTGDRYLDKLVKFVDEQAGLLIDGVLVLKLNPAGLHYMQSRLEALYELESLLTGAPVDYLRAYVSDLGDHRALEQLRRILRLLTSLKVVSVLPPQIRDPTPLSFLPFGRLKVLELRGCDLSTSAARGLLELRHTLEKIVCHNSTDALRHVFASRITEIKDSPQWNRLSFVSCACNGLVLMDESLQLLPAVETLDLSRNKFAKVDNLNKCMKLKHLDLGFNHLRTLAPFSQVSYHIVKLVLRNNALSTLRGIENLKSLEGLDVSYNIISNFSELEFLASLTNLQALWLEGNPLCCARWYRAQVFSFFSCPEKASSIVFILCICLVLKLDAKEISTIDFWKRQIIIASMQKQPTSFGIYVPAKDEAIVEGSNERRRPRLACIESEEGITSICSDEEPVSCTNDIQNREDHDLSNEEAEVEGLINKIEQMKKERSILWLREFKDWMDITSDKSVVTNEEDRAALHHLKENYIRNETNQEQHGEVSRYVSDSVLASGDDSSMNILEPDSSFVDMSASSHRQQNFDHRVLLGNAGGASHSDSGGADVGHLKPLSLEGISSSPSHFKSYHSDTSAIHGAHGMAGNMDISPLTTVCDIFGSQSSSACPTSPPHFQKDLFHRRQHLVEEVLQLSAGSFSMASSDSNTSCSEVDYTEFESSVPEVDNFPCKNYVNGSVHGHISQNHLKDKFNNPSQGVLHAIENGLCLFSSTTDQTSRHASFDVAAAADNGQRAFFVSQDADFMKKRKRKIKAKKRVISILEENPDCNACDHEREQISQGEISIDSKRELGVDEFPEGNHSTQENDDFIVTYFNMYIADFEASEICSHCIRCNFVLQREMIYKEREVAVLLSSHKKLYVLLINVDSDGSGNLLSLLNCHKLEEVCEVLVGMGLQVLRVNFESGEAYLFVTKSIEKSREILCTILMFDSCGGDDRFSIRSLEQVQVELFDNQICGGSNVSIYQYAMVLVCYNNGSDQPWFSRSLFVIGGYVLLCIEDVKQLYSFSTDASVSPYFRLDSCCSIADITEMVTEVRDNSCCVTLTIRNLMPEFHPSTRTNLEPVNHGNTAPGSIKLKIQWYSKDNLLKFVSLMKAIHAEKPVSPLVVRCIS 1101
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal23g0704 1101 Gene3D Ribonuclease Inhibitor 235 335 IPR032675 -
Lal23g0704 1101 ProSiteProfiles Leucine-rich repeat profile. 259 280 IPR001611 GO:0005515
Lal23g0704 1101 SUPERFAMILY Outer arm dynein light chain 1 166 307 - -
Lal23g0704 1101 PANTHER OUTER ARM DYNEIN LIGHT CHAIN 1 PROTEIN 2 1097 - -
Lal23g0704 1101 Coils Coil 413 433 - -
Lal23g0704 1101 ProSiteProfiles Leucine-rich repeat profile. 214 235 IPR001611 GO:0005515
Lal23g0704 1101 PANTHER NISCHARIN RELATED 2 1097 - -
Lal23g0704 1101 SMART LRR_sd22_2 257 278 - -
Lal23g0704 1101 SMART LRR_sd22_2 212 233 - -
Lal23g0704 1101 SMART LRR_sd22_2 190 211 - -
Lal23g0704 1101 Gene3D Ribonuclease Inhibitor 72 234 IPR032675 -
Lal23g0704 1101 Coils Coil 738 758 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal23g0704 Lal-Chr23 9698945 9710834 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal23g0704 - - gmx:100788364 1594.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal16g0930 16 6171686 6181208 Lal23g0704 23 9698945 9710834 LSH