Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal23g0687 ATGTTTTCTGTCAGGGATTTGTGGAGGCGGCATAAGAGGAAGATTTTCATTAGCTTTGGTGTTTTAGGAAGTGGGTATTGTTTGTATAAGCTGTATGGTGCTCACAGGAATAGACTAGATGCACTTGAGAGAGAACTCTCATTTCAGAAAGAAGGTGAAGAGCTTATGAAGGCTCAGATGCAAGCTCACTTTGAGAATATTCAGAGAATTTCTGATACTATAACATTGGTACATGCTATGCACAACTTAAACTGTCGGATATCAGAAGAGTTGGATCTTTCTCAACTTCTTGAGAGGCTAATACAAGGAAAGGGTCAACCGAACACTTTAACACAAGCAGAGAAACTAAATTTGTGGGATAGACTCAAAATTTTAAGTTTTACGAGATTGGCATTGTCAGTATGGGCAACAACAATGATTAGCTTGTATACTAAAGTTCAAGTCAATATACTAGGAAGGCATCTATATATTGATACTGCACGAAGCCTCGGAAGTTCTGATTCAATGGAAACTGGAGATGGGGTTGATAGGGAAAACCAGCAGAAATTTCTAGGAAGTGTTGATTTTCTTTCTCAATATGGTCTGCCTTCCTTGATTTGTGATATGGAAGCGGCATCCAAAGAAATTCTCAAAGGAAAGCAGTTGAGTGGTTTATTCAACAGTACAGCACTTCATGAAACTATCATGCAGATACTTTACAAATTCATGAGTATGGGGAGTCCACATTCCTGGCTAAAGTATATGATGCCTGAGGATGTTATATCACATTCCACATCCACCCGCAAAGATAAACGGGTCCCTTCTGGTGTGACTGAATCTGAACAACTTATGGTGGAAGCACAAGCAGTGTTATTAAGTGCTGAATTTGGGAGCATTGTAGAGATATCTCTGAAAGGAGTGGTTGATACACTAGTGGAGCTAATGGCAGCTAAATTTAAGGGAGGAAGTGTAATTACAGGCATGCCACTGGCTAGAGTGTTGCCTCAAGTTGCACAGATGTGTCCTTCGCTACTTGAAGCGCCCGAAAAAAATCAGTTCATCCAAATCATTAGAAATATACCAGAGGTTGAACTTTTTTTCACTCTCCTCTATGCAAATATGCCAAATGCATAG 1113 0.3971 MFSVRDLWRRHKRKIFISFGVLGSGYCLYKLYGAHRNRLDALERELSFQKEGEELMKAQMQAHFENIQRISDTITLVHAMHNLNCRISEELDLSQLLERLIQGKGQPNTLTQAEKLNLWDRLKILSFTRLALSVWATTMISLYTKVQVNILGRHLYIDTARSLGSSDSMETGDGVDRENQQKFLGSVDFLSQYGLPSLICDMEAASKEILKGKQLSGLFNSTALHETIMQILYKFMSMGSPHSWLKYMMPEDVISHSTSTRKDKRVPSGVTESEQLMVEAQAVLLSAEFGSIVEISLKGVVDTLVELMAAKFKGGSVITGMPLARVLPQVAQMCPSLLEAPEKNQFIQIIRNIPEVELFFTLLYANMPNA 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal23g0687 370 Pfam Peroxin-3 107 366 IPR006966 GO:0005779|GO:0007031
Lal23g0687 370 PANTHER PEROXISOMAL BIOGENESIS FACTOR 3 6 368 IPR006966 GO:0005779|GO:0007031
Lal23g0687 370 PANTHER PEROXISOME BIOGENESIS PROTEIN 3-2-LIKE 6 368 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal23g0687 Lal-Chr23 9568183 9573992 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal23g0687 K13336 - gmx:100782816 566.614
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal23g0687 23 9568183 9573992 Lal23g0687 23 9568183 9573992 ECH
Lal16g0956 16 6342037 6350703 Lal23g0687 23 9568183 9573992 LSH
Lal15g0924 15 7074788 7080735 Lal23g0687 23 9568183 9573992 LSH