Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g0956 ATGTTTTTTGTCAGTGATTTGTGGAGGCAGCATAGGAGGAAGGTTTTCGTTAGTTTTGGTATTTTAGGAAGCGGGTATTGTTTGTATAAGCTCTATGGTGCTCACAGGAGTAGGCTCCATGCACTAGAAAGAGAACTCACAGTTCAGAGGGAAAATGAAGAGCTTATGAAGACTCAGATGCAAGCTCACTTTGAGAATATTCAGAGAATTTCTGATACAATAACATTGCCTCACGCTTTGCACAACTTAAGTTGTCGGATGGCAGAAGAGTTGGATCTTTCTCGACTTCTTGAGAGGCTAATACAAGGAAAGGGTCAGCCAAACACTTTAACACAAGCTGAGAAACTAGAATTGTGGGATACACTCAAAATTCAAAGTTTTACAAGACTGGCATTGTCAGTATGGGTAACAACAATGATTAGCTTATATACTAAAGTTCAAGTCAATATACTAGGAAGGCATCTATATATTGATACTGCACGAAGCCTTGGAAGCTCTGATTCAATGGAAACTGGAGATATCGTTGACAGGGAAGAGCAGCAGAAATTCCTAGGAAGTGTTGATTTTCTTTCTGAATATGGTCTGCCTGCCTTGATTTGTGATATGGAGGCAACAACAAAAGAAATTCTCAATGGGAAGCAGTTAAGTGGTTTGTTCAACAGTGTAGCACTTAATGTAACTATCATGCAGATACTTCACAAATTCATCAGTATGAGTGAGAGTCCACATTCCTGGCTAAAGTATATGTTGCCTGAGGATGTCATATCACATTCCACAACCTCCAGCACTAATGACTTGGTTCCTTCTGGTGTGGCTGACTTTGAACAACTTATGTCGGAAGCACGGACAGTGTTATTAAGTGCCGAATTCGGGAGCATTGTAGAGATATCGCTGAAAGCCGTGGTCGATAAACTTGTGGAGCTCATGGTGACCAAGTTTAGTGGAGGAAGTTTAACTACAGGCATGCCACTGGCTAGAGTATTGCCTCAAGTTGCACAGATGTGTCCTTTGCTACTTGAAGAACCCCTTGAAAATCAGTTCATCAAAATCATTAGATATATACCACAGGTTGAACTTTTTTTCACTCTCCTCTATGCAAATATGCCAAGTGCATAG 1116 0.4059 MFFVSDLWRQHRRKVFVSFGILGSGYCLYKLYGAHRSRLHALERELTVQRENEELMKTQMQAHFENIQRISDTITLPHALHNLSCRMAEELDLSRLLERLIQGKGQPNTLTQAEKLELWDTLKIQSFTRLALSVWVTTMISLYTKVQVNILGRHLYIDTARSLGSSDSMETGDIVDREEQQKFLGSVDFLSEYGLPALICDMEATTKEILNGKQLSGLFNSVALNVTIMQILHKFISMSESPHSWLKYMLPEDVISHSTTSSTNDLVPSGVADFEQLMSEARTVLLSAEFGSIVEISLKAVVDKLVELMVTKFSGGSLTTGMPLARVLPQVAQMCPLLLEEPLENQFIKIIRYIPQVELFFTLLYANMPSA 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g0956 371 PANTHER PEROXISOME BIOGENESIS PROTEIN 3-2-LIKE 6 370 - -
Lal16g0956 371 Pfam Peroxin-3 206 367 IPR006966 GO:0005779|GO:0007031
Lal16g0956 371 Pfam Peroxin-3 107 171 IPR006966 GO:0005779|GO:0007031
Lal16g0956 371 PANTHER PEROXISOMAL BIOGENESIS FACTOR 3 6 370 IPR006966 GO:0005779|GO:0007031
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal16g0956 Lal-Chr16 6342037 6350703 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal16g0956 K13336 - gmx:100782816 540.806
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal16g0956 16 6342037 6350703 Lal16g0956 16 6342037 6350703 ECH
Lal16g0956 16 6342037 6350703 Lal15g0924 15 7074788 7080735 LSH
Lal16g0956 16 6342037 6350703 Lal23g0687 23 9568183 9573992 LSH