Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal23g0686 ATGGGAAAATATATACATATTAAATTTGGAGGCGGCATAAAAAAGAGCCCAACTGAGGTAAGAACACACCTTCATCTCTCTTCTCTCTTCTCTATCTCTGCTTCAAGCACACCCATGGCGGAACGAAACGCCAGCGAAGTTATGATGTTAGAATACACAGCTTCTCATCATCAAAAACCTAACGCTGAATTGATCGACGCATTGCCTTACATCGACGACGATTACAGCGATCCTAGGGTTAAGCAAGAAGTCGATCGTCTCATCGAGGAAGAGATGCGTCGCAGCACTAAGAAACCCGCTGATTTTCTCAAAGATCTACCTTCTCTCCCTAATTTCAATTTTCAGGACTACCCAATGATTGCTAGGGAGCATGAGCGTGTAAGAGCTGGTAGGCCTCCTATTTCGCTTGATAGGTCACGATATGAGTTAGAAATGCCGCCATTGAATAAAAGGAATGATGAAACTGCTTGGAAGCAAGCTGTTCAGAGATCACAACGCCTGCTACAATACCAGATTATGAGGATGGAAAATTTGGATTTGTTGTTGAAATATGGTCCTGATGCCTGGAAGCAGCACAATCAACGATTGGAAGTTTACTTGTCAAGAATGCAGAAATTAGCTCAGGAACAAAATGAAAAGATCGAAAAAGTAAATCGCGAAAGGAAGTATCATCAGCAAAATACGGCATATGAGCTTAATGCTTTGTCCATGCAATGGAAGGAGCTCTGTCAGAAAAATATTGACATCCAAGCTGCGTGTGCTTCGGTTGAAGCTCAGTTAAAAGAACTTAAACTTGAAGCAGCAGAAAGGGGTTGGAATTTGGAAGCTGTCACAGAAAATGGCCAACCGATGAATTCTGATTAA 864 0.4201 MGKYIHIKFGGGIKKSPTEVRTHLHLSSLFSISASSTPMAERNASEVMMLEYTASHHQKPNAELIDALPYIDDDYSDPRVKQEVDRLIEEEMRRSTKKPADFLKDLPSLPNFNFQDYPMIAREHERVRAGRPPISLDRSRYELEMPPLNKRNDETAWKQAVQRSQRLLQYQIMRMENLDLLLKYGPDAWKQHNQRLEVYLSRMQKLAQEQNEKIEKVNRERKYHQQNTAYELNALSMQWKELCQKNIDIQAACASVEAQLKELKLEAAERGWNLEAVTENGQPMNSD 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal23g0686 287 Coils Coil 246 266 - -
Lal23g0686 287 PANTHER BCAS2 PROTEIN 55 271 IPR008409 GO:0006397
Lal23g0686 287 PANTHER PRE-MRNA-SPLICING FACTOR SPF27 55 271 - -
Lal23g0686 287 Coils Coil 193 227 - -
Lal23g0686 287 Pfam Breast carcinoma amplified sequence 2 (BCAS2) 63 269 IPR008409 GO:0006397
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal23g0686 Lal-Chr23 9556528 9566809 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal23g0686 K12861 - gmx:100777152 408.297
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal23g0686 23 9556528 9566809 Lal23g0686 23 9556528 9566809 ECH
Lal15g0925 15 7084696 7088757 Lal23g0686 23 9556528 9566809 LSH