Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal15g0925 ATGGCGGCACGAAACAACGCCCAAGTTATGATGTTAAAATATACAGCACCTTCTCATTATCAACACCCAAACGCTGATATCATCGACGCATTGGCTTACATCGACGACGATTATGGCGACCCTACGGTTAAGCATGACGTTGATCGTCTCATCGAAGAAGAAATGCGCCGCAGCACCAAGAAACCCGCTGATTTTCTCAAAGATCTCCCTCCTCTTCCAAATTTCAATTTTCAGGACTACCCAATGATTGCTAGGGAGCATGAGCGTGTAAGAGCTGGGAGGCCTCCTGTTTTGCTTGATAGGTCACGATATGAGTTAGAAATGCCACCGGTGAACAAAAGGAATGATGAAACTTCTTGGAAGCAAGCTGTACAGAGAGCGCAACGCCTGCTACAATATCAGATCATGAGGATGGAAAATTTGGATTTGTCGTTGAAATATGGTCCTGATGCCTGGAAGCAGCACAATCAACGATTGGAAGTATACTTGTCAAGAATGCAGAAATTAGCTCAGGAACAAAATGAAAAGATCGAAAAAGTAAATCGTGAAAGGAAATATCATCAGCAAAATACGGCATACGAGCTTAACGCTTTGTCCATGCAATGGAAGGAGCTCTGTCAGAAAAATATTGACATCCAAGCGGCGTGTGCTTCGCGAAGCTCAGGGTTGGAACTTGGAAGCTATCACAGAAAATGGTCAATGATTAATTCTAAATTGGGAGATTCGTAA 729 0.4335 MAARNNAQVMMLKYTAPSHYQHPNADIIDALAYIDDDYGDPTVKHDVDRLIEEEMRRSTKKPADFLKDLPPLPNFNFQDYPMIAREHERVRAGRPPVLLDRSRYELEMPPVNKRNDETSWKQAVQRAQRLLQYQIMRMENLDLSLKYGPDAWKQHNQRLEVYLSRMQKLAQEQNEKIEKVNRERKYHQQNTAYELNALSMQWKELCQKNIDIQAACASRSSGLELGSYHRKWSMINSKLGDS 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal15g0925 242 PANTHER PRE-MRNA-SPLICING FACTOR SPF27 16 218 - -
Lal15g0925 242 Coils Coil 156 190 - -
Lal15g0925 242 Pfam Breast carcinoma amplified sequence 2 (BCAS2) 27 218 IPR008409 GO:0006397
Lal15g0925 242 PANTHER BCAS2 PROTEIN 16 218 IPR008409 GO:0006397
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal15g0925 Lal-Chr15 7084696 7088757 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal15g0925 K12861 - gmx:100783349 360.533
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal15g0925 15 7084696 7088757 Lal15g0925 15 7084696 7088757 ECH
Lal15g0925 15 7084696 7088757 Lal23g0686 23 9556528 9566809 LSH