Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal23g0682 ATGTTCTGCTTGCTCATGGTTTTGAGTCTATGCACTATGTTTAAGCCTTACATAGGTCCTATTCATGTTTTGAGCCTAAAGATCTCAATTAGTGTTGACACCAAAATGCTTATGGTTAATGACACCAGCACCTCTTCACATATAGCCAAAGATGGAAGAGTTGTACCAAAGATTATTTTCAATGACACCAGAAGCTCTGAACAAATATCTAAAGTTGAAGAAAATGTAACAAACAATATCATCAATGCCACCAGCATCTTTCCACCAAAAGGTGCAGTTGAAGAAATAGAAGCAAAGAAAGTGGAGGGTGAGCCATCACTATGCATTTCAGAAGACAGAACAGATTTTTGCCAAACTCGAGGAGATATCCGAATCCATGGAAAATCCTCATCCGTTTACATCGTGTCATCGAAAACATCGATCTTGGCAGAAAACATCTCATGGAGCATAAGGCCTTATGCCAGGAAGGATGATATATTTGCAATGGTAAAAGTAAGAGAATGGTTAGTAAATGAAGTAAAAGTTAGTCAAAAAGTCCCTCATTGCACTCAAAATCACAGCATTCCAGCAGTACTATTTTCTACTGGAGGCTACATTGGCAACCACTTTCATGAATTCACTGATGTTCTTATTCCACTGTTTTTGACTTCTAGACAATTTAATGGACAAGTACACTTTATCATAACTGATAAGAGACCTTGGTGGATTTTAAAGTACAAACCAGTTCTTAACAAGCTCACCAACTATGAGATTATGGACATTGATAGAGATGATGAAGTTCATTGCTTTCCAAGTGTGATTGTTGGTCTCAAGAGGAACCAAAAGGAGCTTAGCATTGACCCTCAAAAGTATTCATGTTCCATGAAAGACTTCAGGGATTTTTTAAGAAGTTCATATTCATTAAAGAGAGTTCAAGCAATCAAAACCAAAGATAATCAACCTAAGAAGCCTAGGCTGCTGATTATTTCAAGACAAAGATCAAGATCCTTCACTAATGTAGCTCAAATAGCAAAATCGGCTAAAAGACTCGGTTTCGTCGTGATTATTAAGGAAGCAGGAGGGAGCATGTCAAGCTTTGCAGATGCTGTGAATTCTTGTGATGTACTAATGGGAGTTCATGGTGCTGGTCTCACTAACATACTTTTCCTTCCTGAAAATGCAGTTTTCATCCAAGTTGTGCCTTATGGTAAGGTGGAGTGGCTTGCGAAAAATGACTTTGCTGAACCCTCAAAGGGTATGAACCTAAAGTACTTAGAATACAAAATCAGGTTGGAAGAAAGCACCCTTATACAACAATACCCTTTAGACCATATAATTGTAAAGGACCCTCCATCAATTGAGAAAATAGGTTGGGAAACATTTAAGACTATCTACTTTGACAAACAAAATGTAAGGCTTGATGTTAAAAGGTTTAAGCATACATTGCTGAAAGCTCTTGAGCTATTGCATCAGTAG 1455 0.3766 MFCLLMVLSLCTMFKPYIGPIHVLSLKISISVDTKMLMVNDTSTSSHIAKDGRVVPKIIFNDTRSSEQISKVEENVTNNIINATSIFPPKGAVEEIEAKKVEGEPSLCISEDRTDFCQTRGDIRIHGKSSSVYIVSSKTSILAENISWSIRPYARKDDIFAMVKVREWLVNEVKVSQKVPHCTQNHSIPAVLFSTGGYIGNHFHEFTDVLIPLFLTSRQFNGQVHFIITDKRPWWILKYKPVLNKLTNYEIMDIDRDDEVHCFPSVIVGLKRNQKELSIDPQKYSCSMKDFRDFLRSSYSLKRVQAIKTKDNQPKKPRLLIISRQRSRSFTNVAQIAKSAKRLGFVVIIKEAGGSMSSFADAVNSCDVLMGVHGAGLTNILFLPENAVFIQVVPYGKVEWLAKNDFAEPSKGMNLKYLEYKIRLEESTLIQQYPLDHIIVKDPPSIEKIGWETFKTIYFDKQNVRLDVKRFKHTLLKALELLHQ 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal23g0682 484 Pfam Glycosyltransferase 61 299 389 IPR007657 GO:0016757
Lal23g0682 484 PANTHER GLYCOSYLTRANSFERASE-RELATED 2 482 - -
Lal23g0682 484 PANTHER GLYCOSYLTRANSFERASE 2 482 IPR007657 GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal23g0682 Lal-Chr23 9494880 9497980 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal23g0682 - - cam:101508368 657.521
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal23g0682 23 9494880 9497980 Lal23g0682 23 9494880 9497980 ECH
Lal16g0961 16 6378755 6382151 Lal23g0682 23 9494880 9497980 LSH