Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g0961 ATGTACGATACAATATTCGCCAAAAGCTTTAGTCGTCGTGAGCAGAAAAGATTGAGATATGGAGCATTTTTGTTCTGCTTGCTCATAGTTTTGAGTCTTTGCACTGTGATTAAGCCTTACTTGGGTCCTATTCATGTTTTGAGCCTAAAGCTCTCACTTGTTGTTGATACCAAAATGTTTATGGTTAATGACACCAGCAATTCTCCACATACAGGCAAAGTTGAAAACCTTCTAGCCAAAATTATTGAAGACACCAAAAGTTCTCTACATATGAATGATGCTGAAAACATTTTACCGGAGATTCTTTTCAATGACACCAGAAGCTCTCAACAAATAGCCAAAGATGAAGAAAATGTAACAAAGAATATTCTCACCAATGGCACCAGAAGCTCTCCACAAAAAGCTGAAGTTGAAGAAATAGAAACAAAGAAAGTGGATCCACTGTGCACTTCAGAAGAAAGAACAGATTTTTGCCAATCTCGAGGAGATATCCGAATCCATGGAAAATCCTCATCTGTTTACATTGTGTCACCTGAAACAACCCTCTTGGCAGAAAACATTTCATGGAGAATAAGGCCTTATGCTAGGAAGGGTGATACACATGCAATGGTACAAGTAAGAGAGTGGTCAGTGAAGCAAGTAAAAGTTAGCCAGAAAGTCCCTCAGTGCACCAAAAATCACAGCATTCCAACTGTGCTGTTTTCCACTGGAGGCTACATTGGCAACCACTTCCATGACTTCACTGATGTTCTTATTCCACTTTTTTTAACTTCTAGACATTTTAATGGAGAAGTACAATTTATCATAACTGATAAGAGACCTTGGTGGATTTTAAAGTACCAACCAGTTCTTAACAAGCTCTCCAACTATGGCATTATGGACATTGATAGAGATAATGAAGTTCATTGCTTTCCAAGTGTGAGTGTTGGTCTCAAGAGGTACCACAAAGAGCTGAGCATTGATCCTCAAAAGTATTCATATTCCATGAAAGACTTCAGGGATTTTTTGAGAAGTTCATATTCATTAAAGAGAGTTCAAGCAATCAAAATCAGAGATGATCAACCTAAGAAGCCTAGGCTCCTGATTATTTCAAGACAAAGATCAAGATCCTTCACTAATATAGCTCAAATAGCAAAAATGGCTAAAAGATTGGGTTTCATTGTCATTATTACGGAAGCAGGAGGGAGCATGTCTAGCTTTGCCGATGCTGTGAATTCGTGTGATGTCCTAATGGGAGTTCATGGTGCTGGTCTCACTAACATACTTTTCCTTCCTGAAAATGCAGTTTTCATCCAAGTTTTGCCTTATGGTAGTGTGGAGTGGCTTGCTAAAAATGACTTTGCTGAGCCCTCAAGGGATATGAACCTAAAGTACTTGGAATACAAAATAAGGTTGGAAGAAAGCACTCTTATACAGCAATACCCTCTAGACCATATAATTTTGAAGAACCCCCCATCAATTGGGAAGATAGGTTGGGAAACATTTAAGACTGTTTATTTCGACAAACAAAATGTAAGGCTTGATGTTAATAGGTTTAAGCCTACATTGCTGAAAGCCCTTGAGCTATTGCATCAGTAG 1578 0.3847 MYDTIFAKSFSRREQKRLRYGAFLFCLLIVLSLCTVIKPYLGPIHVLSLKLSLVVDTKMFMVNDTSNSPHTGKVENLLAKIIEDTKSSLHMNDAENILPEILFNDTRSSQQIAKDEENVTKNILTNGTRSSPQKAEVEEIETKKVDPLCTSEERTDFCQSRGDIRIHGKSSSVYIVSPETTLLAENISWRIRPYARKGDTHAMVQVREWSVKQVKVSQKVPQCTKNHSIPTVLFSTGGYIGNHFHDFTDVLIPLFLTSRHFNGEVQFIITDKRPWWILKYQPVLNKLSNYGIMDIDRDNEVHCFPSVSVGLKRYHKELSIDPQKYSYSMKDFRDFLRSSYSLKRVQAIKIRDDQPKKPRLLIISRQRSRSFTNIAQIAKMAKRLGFIVIITEAGGSMSSFADAVNSCDVLMGVHGAGLTNILFLPENAVFIQVLPYGSVEWLAKNDFAEPSRDMNLKYLEYKIRLEESTLIQQYPLDHIILKNPPSIGKIGWETFKTVYFDKQNVRLDVNRFKPTLLKALELLHQ 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g0961 525 Pfam Glycosyltransferase 61 340 430 IPR007657 GO:0016757
Lal16g0961 525 PANTHER FAMILY 61 PROTEIN, PUTATIVE-RELATED 1 525 - -
Lal16g0961 525 PANTHER GLYCOSYLTRANSFERASE 1 525 IPR007657 GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal16g0961 Lal-Chr16 6378755 6382151 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal16g0961 - - lja:Lj4g3v3114090.1 736.102
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal16g0961 16 6378755 6382151 Lal16g0961 16 6378755 6382151 ECH
Lal16g0961 16 6378755 6382151 Lal23g0682 23 9494880 9497980 LSH