Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal23g0493 ATGGAGACCAACATTTCTTGTTTCTTTTCCGAACCCTTCTTCATAGCAGTTACCGTAACCGCTCTCTGTTTCTTCTTATTCCTCTTCTCTCTCCTCAGATCCTCTTTTACTCTCGCGCAGAAGAAGAAACACTGCGATTGTTCTTGTTCCTGCAACGGCGTCGTTTCCAACTCCGATTTTTCTTCCGTGCCGTATTTGAACGGCGGCACCGGGGTGGAGATGATGGAACTGAGTCCGGCTGCGGTGGCGTTTTCCGAGCGGCGGACTGGGTCGTCGATGATGGAGGAATTGGTTCCGGAGATTACGACTCACGCGCTGAGTTACTTGGATTATCCGAGTTTGTGTCGTCTTTCTATGACTAATTCTTTGATGCGGAAGGCTGCTAATGATGATAATGCCTGGAAAGCCTTATATCATAAGGACTACACATTGGAACAAGATAGTGTTACACCAACTAATGGATGGAAGGCTTACTATGCTGCAACAAGAGCAATTGTGAATGTTAATACAGAATTCTTCAACATTGTAAGAGATAAGTCTATTTCAACAATGAGCCGTTTTTGGCTAAATGCAGATTACGTGAAGTGCATTCATGCCTCTGGAGAGCTCTTTTCGGGGTATAATGCAGTAATGCAGAGCTGGCAACTTGTTTTCAATTGGGAGCAAGGATTGAACTTTCAGGTTCGGGATGTACGTGTACGGGTCTTGACAGACATGGCTTGGGTTACCATGAAAACTTATGTTGACATGGATACAGGGCCATTCAATATTACCAATGTCTTTGAGTTCCATAATGGACGGTGGTATATGGTTCATCATCACAGTTCTGTGATGAATGGGGAGGTGGAGCAACATAATGTGCATGGATAA 870 0.446 METNISCFFSEPFFIAVTVTALCFFLFLFSLLRSSFTLAQKKKHCDCSCSCNGVVSNSDFSSVPYLNGGTGVEMMELSPAAVAFSERRTGSSMMEELVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDYTLEQDSVTPTNGWKAYYAATRAIVNVNTEFFNIVRDKSISTMSRFWLNADYVKCIHASGELFSGYNAVMQSWQLVFNWEQGLNFQVRDVRVRVLTDMAWVTMKTYVDMDTGPFNITNVFEFHNGRWYMVHHHSSVMNGEVEQHNVHG 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal23g0493 289 PANTHER F-BOX PROTEIN SKIP8 7 289 IPR044260 -
Lal23g0493 289 Pfam SnoaL-like domain 166 279 IPR037401 -
Lal23g0493 289 SUPERFAMILY NTF2-like 160 278 IPR032710 -
Lal23g0493 289 Gene3D - 156 287 - -
Lal23g0493 289 Gene3D - 82 135 - -
Lal23g0493 289 SUPERFAMILY F-box domain 90 176 IPR036047 GO:0005515
Lal23g0493 289 ProSiteProfiles F-box domain profile. 91 137 IPR001810 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal23g0493 Lal-Chr23 7663293 7668241 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal23g0493 - - adu:107479710 460.299
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal23g0493 23 7663293 7668241 Lal23g0493 23 7663293 7668241 ECH
Lal16g1143 16 7791686 7796733 Lal23g0493 23 7663293 7668241 LSH