Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g1143 ATGGATAATAACATTTCCTGCGTCTTTTCCGAACCCTTCTTCATCGCCGTTTCCGTAACCGCTCTCTGTTTCTTCCTATTCCTCTTTTCTTTCCTCAGATCCTCTTCTTCTCTCTTCCTTAACAACAAACACTGCAATTGTGCATGTTCCTGCAACGGCGTCGTTTCCAATTCCGATTCTTCTTCCTTGCCGTACTTGAACGGTGGCACTGCGGTGGAGATGCTGGAACTGAGTCCGGCTCCGGTGGTGTTGTCGGAGCGGCGAACTGGGTCGTCGATGATGGAGGAATTGGTTCCGGAGATTAAGACGCACGCGCTGAGTTACTTGGATTTTCCGAGTTTGTGTCGTCTTTCCATGACCAATTCTTTGATGCGAAAAGCTGCTAATGATGATAATGCGTGGAAAGCCTTGTATCACAAGGACTACACACTGGAACAAGATTGTGTCACACCAACTAATGGGTGGAAGGCTTACTATGCTGCAACAAGAGCAATTGTGAATGTTAATACAGAATTCTTCAACATTGTAAGAAATAATTCTATTCCAGCAATGAGTCATTTTTGGCTAAATGCAGATTACGTGAAATGCATTCATGCCTCTGGAGATCTCTTTTCAGGGTATAACGCAGTACTGCAGAGTTGGCAACTTGTGTTCAACTGGGGGCAAGGATTGAACTTTGAAGTTCGGGATGTACGTGCGCGGGTCTTGACAGACATGGCTTGGATTACCATGAAAACATATGTTGACATGGATACAGGGCCATTCAATACGACTAATATCTTTGAGTTCCATAACGGGCGATGGTACATGGTTCATCATCACAGTTCTGTGATGAATGGGGAGATGGAGCAACAACATGTGCATGGATGA 870 0.4506 MDNNISCVFSEPFFIAVSVTALCFFLFLFSFLRSSSSLFLNNKHCNCACSCNGVVSNSDSSSLPYLNGGTAVEMLELSPAPVVLSERRTGSSMMEELVPEIKTHALSYLDFPSLCRLSMTNSLMRKAANDDNAWKALYHKDYTLEQDCVTPTNGWKAYYAATRAIVNVNTEFFNIVRNNSIPAMSHFWLNADYVKCIHASGDLFSGYNAVLQSWQLVFNWGQGLNFEVRDVRARVLTDMAWITMKTYVDMDTGPFNTTNIFEFHNGRWYMVHHHSSVMNGEMEQQHVHG 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g1143 289 Pfam F-box domain 96 135 IPR001810 GO:0005515
Lal16g1143 289 SUPERFAMILY F-box domain 90 189 IPR036047 GO:0005515
Lal16g1143 289 SUPERFAMILY NTF2-like 160 278 IPR032710 -
Lal16g1143 289 Gene3D - 155 287 - -
Lal16g1143 289 Pfam SnoaL-like domain 166 279 IPR037401 -
Lal16g1143 289 Gene3D - 83 135 - -
Lal16g1143 289 PANTHER F-BOX PROTEIN SKIP8 8 289 IPR044260 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal16g1143 Lal-Chr16 7791686 7796733 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal16g1143 - - adu:107479710 437.573
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal16g1143 16 7791686 7796733 Lal16g1143 16 7791686 7796733 ECH
Lal16g1143 16 7791686 7796733 Lal23g0493 23 7663293 7668241 LSH